Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00124 ATGACGCAAAAGATTGTTATAAAGGTTTCATGCAATAACAAATGCAGAAGGGCTACTTCTACTTGTGGTAAATGCAAAAGCAAGATCCTCAAAGTTGCGGCGGTTGAACCGGGTGTGAGTTCATTAGGGTTAGAAGGGGCAGATAAAGATGAATTGGTGGTCATTGGAAATGGGGTGGATCCAGTTTGTTTGGCCAAGGCTTTGAGAAAGAAATTCAACGTTGCACAAATCATAAAGGTTGAAGAAATTAAGGAAGACAAAAAAGATGAAAAAAAAGATTCGTTGCCGCCGTGGTCTTATGCTCCCGGCTACTACTGTCCACCGAACGTGAAAGGAAATTCCAAATGCAAAATCGAAACTACTTGTCGTCTTGCACAGGCACACTGCACATTCAATTCCGATGCCGACTACTATTTTTGCAAATCCGATCCTTTCACCATGGCCATCTGGAACTGGAATTTTTCCGTGGGCTTTTCTGTGAATTGGAGTAATTCTTGTGTCATGTTGTCTGCGGAAACAAGAGACAAGATTCCCATTGCTTCTTTCGTTATTCGAATCATTGATTCTGCCAAAGATCGCAAGGTCTTGGCTAAATTAGCGAGAAAATTCATTATTGACCTTGAGTTCCTCGATTTGAAAGCTTCATCTCCAAATGGAAAAGATGTTTATTCCATTTGGCCTACCAAAATCATGAATCATCAGAAACCAAATTCTGCAGTTCTTGAATCTGTTGGTCGAATGCTGACAGAAAAAATCCATACTGACATAACAATAAATACTTCAGATGGAAGCATTGGAGCTCACCGCGCAGTTCTTGCTGCTCGATCACCTGTTTTTCATAGCATGTTCAAACACAATCTAAAAGAGAATGATGATTCCACCATAAACATCTCAGACATGTCAATAGGATCTTGTCAAGCATTCATAAACTATCTTTATGGTATCATTGATGATGAAGAATTTTTCAAGCATAGATTGGAGCTTCTTCATGCGGCAAACAAATATGACATTTGTGATTTAAGAGATGTATGCAATGAGAGCCTTGCAGAGGATATTGATTCAAGCAATGTTCTTGAGAGGCTTCAGGATTCATATCTGTATCAATTGCCAAAGCTGAAGCTTCATTGCATGCAATATCTTGTCAAGTTTGGAAGGATATTTGACATTAAAGATGATTTCGATGCATTCTTGCAAACTGTAGATAAGGATTTGGTTATTCAACTCCTTGGTGAAGTTCTTAGTGTCTGGAAAGGATCTTAA 1260 0.3897 MTQKIVIKVSCNNKCRRATSTCGKCKSKILKVAAVEPGVSSLGLEGADKDELVVIGNGVDPVCLAKALRKKFNVAQIIKVEEIKEDKKDEKKDSLPPWSYAPGYYCPPNVKGNSKCKIETTCRLAQAHCTFNSDADYYFCKSDPFTMAIWNWNFSVGFSVNWSNSCVMLSAETRDKIPIASFVIRIIDSAKDRKVLAKLARKFIIDLEFLDLKASSPNGKDVYSIWPTKIMNHQKPNSAVLESVGRMLTEKIHTDITINTSDGSIGAHRAVLAARSPVFHSMFKHNLKENDDSTINISDMSIGSCQAFINYLYGIIDDEEFFKHRLELLHAANKYDICDLRDVCNESLAEDIDSSNVLERLQDSYLYQLPKLKLHCMQYLVKFGRIFDIKDDFDAFLQTVDKDLVIQLLGEVLSVWKGS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00124 419 Gene3D - 1 86 - -
Adu07g00124 419 PANTHER OS08G0495500 PROTEIN 198 418 - -
Adu07g00124 419 SMART BTB_4 254 352 IPR000210 GO:0005515
Adu07g00124 419 SUPERFAMILY POZ domain 231 350 IPR011333 -
Adu07g00124 419 ProSiteProfiles BTB domain profile. 254 313 IPR000210 GO:0005515
Adu07g00124 419 Gene3D Potassium Channel Kv1.1; Chain A 226 382 IPR011333 -
Adu07g00124 419 PANTHER OS08G0495500 PROTEIN-RELATED 198 418 IPR044714 -
Adu07g00124 419 Pfam BTB/POZ domain 248 350 IPR000210 GO:0005515
Adu07g00124 419 CDD BTB_POZ_ZBTB_KLHL-like 253 335 - -
Adu07g00124 419 PANTHER OS08G0495500 PROTEIN 114 198 - -
Adu07g00124 419 PANTHER OS08G0495500 PROTEIN-RELATED 114 198 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00124 Adu-Chr7 1144394 1150972 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Adu07g00124 BTB 8.7e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00124 K10523 - gmx:100790186 340.502