Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00122 ATGAAAGAACATTATTCCAGATGCGAAATCGAAACTACTTGTCGTCTTGCACAAGCACAATGCACATTCAATTTCGGTGACTACCATCTTTGCAAATCCGATCGTTTCACCGTCGCCATCTGGAACTGGAATTTTTCTATGGATTGGGCTGCTTCTTGTGTCACATTGTCTGCGGAAATAAGGGACAAGGTTCCCATTGCATCTTTCGTTATTCGAATCATTGACTCTGCCAAAGATCGCAAGATCTTGGCTAAATTAGAGGCAAAAGATAAGTTGCTTAAACAAGGAGAAAGATTTGAGTGCAAAGTTGGGTTACTTCCAGGGAGATTCATTATTGACCTTGAGTTCCTCGATTTGAAAGCTTCATCTCCAAATGGAACAGATGTTTGTTCCATTTGGCCTACCAAAATCATGAATCAGAAACCAAATTCTGCAGTTCTTGAATCTGTTGGTCGAATGCTGATAGAAAAAATCCATACTGACATAACAATAAATGCTTCAGATGGAAGCATTGGAGCTCACCGCGCAGTTCTTGCTGCTCGATCACCTGTTTTTCATAGCATGTTCAAACACAATCTAAAAGAGAATGATGATTCCACCATAAACATCTCAGACATGTCAATAGGATCTTGTCAAGCATTCATAAACTATCTTTATGGTGTCATTGAAGATGAAGAATTTTTCAAGCATAGATTGGAGCTTCTTCATGCGGCAAACAAATATGACATTTGTGATTTAAGAGATGTATGCAGTGAGAGCCTTGCAGAGGATATTGATTCAAGCAATGTTCTTGAGAGGCTTCAGGATTCATATCTGTATCAATTGCCAAAGCTGAAGCTTCATTGCATGCAATATCTTGTCAAGTTTGGAAGGATATTTGATATTGAAGATGATTTCAATGCATTCTTGCAAACTGTAGATAAGGATTTGGTTATTCAACTCCTTGGTGAAGCTCTTAGTGTCTTGAAAGGCTCTTAA 978 0.3855 MKEHYSRCEIETTCRLAQAQCTFNFGDYHLCKSDRFTVAIWNWNFSMDWAASCVTLSAEIRDKVPIASFVIRIIDSAKDRKILAKLEAKDKLLKQGERFECKVGLLPGRFIIDLEFLDLKASSPNGTDVCSIWPTKIMNQKPNSAVLESVGRMLIEKIHTDITINASDGSIGAHRAVLAARSPVFHSMFKHNLKENDDSTINISDMSIGSCQAFINYLYGVIEDEEFFKHRLELLHAANKYDICDLRDVCSESLAEDIDSSNVLERLQDSYLYQLPKLKLHCMQYLVKFGRIFDIEDDFNAFLQTVDKDLVIQLLGEALSVLKGS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00122 325 CDD BTB_POZ_ZBTB_KLHL-like 159 241 - -
Adu07g00122 325 PANTHER OS08G0495500 PROTEIN-RELATED 6 324 IPR044714 -
Adu07g00122 325 Gene3D Potassium Channel Kv1.1; Chain A 134 288 IPR011333 -
Adu07g00122 325 SUPERFAMILY POZ domain 140 256 IPR011333 -
Adu07g00122 325 Pfam BTB/POZ domain 157 256 IPR000210 GO:0005515
Adu07g00122 325 SMART BTB_4 160 258 IPR000210 GO:0005515
Adu07g00122 325 ProSiteProfiles BTB domain profile. 160 219 IPR000210 GO:0005515
Adu07g00122 325 PANTHER OS08G0495500 PROTEIN 6 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00122 Adu-Chr7 1136807 1139491 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Adu07g00122 BTB 3.8e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00122 K10523 - gmx:100790186 355.91