Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu07g00085 | ATGTCTGTGAATAAAAGAATTTCAGGATCAAATGGGAGGTTGCAACCAAGCATGAAGTCATGGAAGGTCAATGAGCCTCTAAATGGGTCTAATTCTCCTCATAGGACAACATGGAGGAGGAAGCCCTTGCTCCTTTTGATTGTTTTTGGTGTTATCATAGCAAGTTTCGGGCTTTTCTTGAGTTTCAAGAATAGTGAGTATTTGATGAGCAAGGAGAAAGAAGCTGCTTGTGAAGAGAGTTCAAGAATCTTGCTACAAAGATACAACATTAGCAGGAAGCAGCTTCATGCTTTGGCTTCCCTATTCTCTGGATCAGATCAGAACATGCTGCAGTCATGGGAACTGCATGTCTCGGCAATTATGGACTATACAAGTTCATTAAATTTGGTTAAAGAGTACTGGTGGGTCCTTGTAGGAATTATAATATCATGCAATTTGTCTGGATTCTGTTTACTAAGAATTCAAAAGCAGAAGCTAGTTGAGGGACATCAAGTTGGTCATCAAAAGCAGCTGCGAGATTTATCCCGGAACCCTTTAAAGAGTGTTGGGACTTGGAGGAAATGGTCACTAGCTATATTCTTGTCACTTGGAATACTTTTTTCCATTTGGTTATTCTGTGACTTATACACCGACTTTAAGCAGACAAGAGAAGAAATGCTTACCAATATGTGTGACGAGCGTGCCCGTATGCTTCAAGATCAGTTTAATGTCAGCATGAACCATGTTCATGCACTGGCTGTTCTTGTTTCGACATTTCACCATGGTAAACATCCATCTGCAATTGACCAGAAAATTTTTGGAGAATATACCGAGACTACTGCATTTGAGAGACCACTTACTAGTGGTGTTGCTTATGCTAAGAAAGTTCTCCACTCTGATAGGGCTGAGTTTGAGAAGCAGCATGGGTGGACTATTAAGAAAATGGAAACAGAGAATGAAGCACTAGTCCAAGATTGTATTCCAGAAAAATTGGATCCGGCGCCCATTCAGGATGAATATGCACCGGTGATTTTTGCTCAAGAAACGGTTTCTCATATTGTGTCTATTGACATGATGTCAGGGAAGGAGGACCGTGAGAATATCTTGCGAGCAAGGGCAACAGGAAAGGGGGTTCTGACATCCCCTTTTAAACTTCTAAAATCAAATCACCTTGGTGTTGTACTTACATTTGCTGTTTATAACAGCAATGTTCCTGCAGATGCTACACCAAAGCAGCGAATCGAAGCTACTGTGGGGTACCTGGGTGCTTCATATGATGTTCGATCACTGGTGGACAAGCTTCTCCACCAACTTGCAAGCAAGCAAATAATTGTTGTAAATGTTTATGATACAACCAACGCATCTGCACCGATTACAATGTATGGTACTGATGTTGCTGATACTGGACTACTACGTATAAACAGTCTAGATTTTGGGGATCCACTTCGAAAACATGAAATGCACTGCAGGTTCAAGCAGAGGCCTCCTCTCCCTTGGAAAGCAATCAATTACTCGGTTGGCATATTTCTCATCGTTTTGCTTATTGGTTATATATATTATGTAGCCATAAAACGAATAGAAAAGGTGGAGGATGACACTCAAAAAATGGCGGAGCTGAAAGTTCGTGCTGAAGCTGCAGATGTTGCAAAATCTCAGTTTCTTGCAACAGTTTCTCATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGACACTGAACTTGATGAAAACCAGATGGATTATGCCCAAACTGCGCATAAGAGTGGTAAGGATCTTATATCAGTGATAAATGAGGTTCTTGATCAGGCTAAGATTGAGGCACGCAAGCTTGAACTTGAAGCTGTAGCTTTTGATCCACATGCTATTCTAGAGGAAGTTCTATCACTTTTCTCGGGAAAAGCTAAAGAAAAAGGAATTGAGTTGGCTGTTTATGCATCCAATGAAGTACCCAAAGTTGTCATTGGTGATCCTAAACGGTTCTGGCAAATAATTACTAATCTTGTTGGCAATTCACTCAAGTTCACTCATGATAAAGGACATGTGTTTGTCTCGATTCATCTGGCAAATGAAGTGAAGAACCCACTTCACAGTATGGATGCAGTGCTGAGGGAAGGCTTAGAGTTGGATCATGATTTGTCAGACAATACATATAATACATTAAGTGGGTTCGCTGTAGGAAACCGATGGAAAAGCTGGGCCAACTTTAAAAAGTTAAATAGTATGGATTTGATGGAAGAGCCTGAATTGATTCAATTACTAGTAACAGTTGAGGATACAGGTATAGGAATTCCTATTGATGCGCAAAGCCGTATATTCACACCTTTTATGCAGGCCGATAGTTCGACCTCTCGAACATATGGTGGAACTGGAATAGGACTGAGCATTAGTAAATGTCTTGTTGAGCTCATGAGAGGAGAAATTGGTTTTGTTAGTGAGCCTGGAACTGGCAGTACTTTTACATTTACTGCAACTCTCAGAAAAGGAGAAACCACATCTTTGGATGCAAAGTGGCAGAATTTCAGTACATTTGATTCACAGTTGCAAGGGTTGAGAGCATTAGTGGTAGATAGAAGAAAAATCCGAGCTGAGGTCACAAGATATTATCTACAGAGGTTGGGGATGTCGGTGGATGTTATGTCAAGTTTGAAATCTGCATGTTCTTGTCTAACTGGTTCTTGCAACATGAGAGTGTCGAAGCAGTTTGCGATGATTCTGATAGACAAGGATGCTTGGGATAAGGAAAGTAGCACCTTATACTCCATCAAGAAACAGAAAAAGAATGGCACCAATGGAGACCGAATAAACTTTCCAAAAGTTTTTCTCCTGGCCACACACCTTAGCCCGAACGAATGTGATGAGCTCAAGACAAATGGTGTCATTGATGATATATTAATGAAGCCTTTTTGGCTCAGTGTTTTGGTTTGCTCCTATAGAGAATCCCTTGGAATTGAAAAAAGGCAAATAAGTAGGAAGAAAGTATCCAAACTTGGGAATCTATTATTACAGAAAAGAATTTTGGTGGTTGATGATAATGCAGTGAACAGAAAAGTTGCAGAAGGTGTTTTACAGAAATATGGGGCAACAGTTACTTGTGTTGAGGGTGGCAGGGCTGCTCTACAGATGCTTAAGCCCCCGCACAATTTCGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGTTTTGAAGTGACAAGGCAAATCCGCATCCTAGAGAACGACGTAAATGAGAAAATTGCATGTGGGGAAGCATCAGCTGAAATGTTTGGGGATATCTTTTATTGGCACATTCCAATACTAGCAATGACAGCTGATGTAACTCAGGCTTCAAATGAAGAGTGCAAAAAGTGTGGGATGGATGGCTATGTGTCAAAGCCGTTTGAGGAAGAGCAGCTCTACACGGCCATGGCACGCTTCTTCAAGCCTAGTTCATAG | 3435 | 0.4102 | MSVNKRISGSNGRLQPSMKSWKVNEPLNGSNSPHRTTWRRKPLLLLIVFGVIIASFGLFLSFKNSEYLMSKEKEAACEESSRILLQRYNISRKQLHALASLFSGSDQNMLQSWELHVSAIMDYTSSLNLVKEYWWVLVGIIISCNLSGFCLLRIQKQKLVEGHQVGHQKQLRDLSRNPLKSVGTWRKWSLAIFLSLGILFSIWLFCDLYTDFKQTREEMLTNMCDERARMLQDQFNVSMNHVHALAVLVSTFHHGKHPSAIDQKIFGEYTETTAFERPLTSGVAYAKKVLHSDRAEFEKQHGWTIKKMETENEALVQDCIPEKLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARATGKGVLTSPFKLLKSNHLGVVLTFAVYNSNVPADATPKQRIEATVGYLGASYDVRSLVDKLLHQLASKQIIVVNVYDTTNASAPITMYGTDVADTGLLRINSLDFGDPLRKHEMHCRFKQRPPLPWKAINYSVGIFLIVLLIGYIYYVAIKRIEKVEDDTQKMAELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDENQMDYAQTAHKSGKDLISVINEVLDQAKIEARKLELEAVAFDPHAILEEVLSLFSGKAKEKGIELAVYASNEVPKVVIGDPKRFWQIITNLVGNSLKFTHDKGHVFVSIHLANEVKNPLHSMDAVLREGLELDHDLSDNTYNTLSGFAVGNRWKSWANFKKLNSMDLMEEPELIQLLVTVEDTGIGIPIDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVELMRGEIGFVSEPGTGSTFTFTATLRKGETTSLDAKWQNFSTFDSQLQGLRALVVDRRKIRAEVTRYYLQRLGMSVDVMSSLKSACSCLTGSCNMRVSKQFAMILIDKDAWDKESSTLYSIKKQKKNGTNGDRINFPKVFLLATHLSPNECDELKTNGVIDDILMKPFWLSVLVCSYRESLGIEKRQISRKKVSKLGNLLLQKRILVVDDNAVNRKVAEGVLQKYGATVTCVEGGRAALQMLKPPHNFDACFMDLQMPEMDGFEVTRQIRILENDVNEKIACGEASAEMFGDIFYWHIPILAMTADVTQASNEECKKCGMDGYVSKPFEEEQLYTAMARFFKPSS | 1144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu07g00085 | 1144 | ProSiteProfiles | Histidine kinase domain profile. | 549 | 826 | IPR005467 | - | |
Adu07g00085 | 1144 | Pfam | CHASE domain | 260 | 454 | IPR006189 | - | |
Adu07g00085 | 1144 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 530 | 608 | IPR036097 | GO:0000155|GO:0007165 | |
Adu07g00085 | 1144 | Pfam | His Kinase A (phospho-acceptor) domain | 542 | 606 | IPR003661 | GO:0000155|GO:0007165 | |
Adu07g00085 | 1144 | Gene3D | - | 67 | 108 | - | - | |
Adu07g00085 | 1144 | Gene3D | - | 210 | 260 | - | - | |
Adu07g00085 | 1144 | SMART | HKATPase_4 | 654 | 826 | IPR003594 | - | |
Adu07g00085 | 1144 | PRINTS | Bacterial sensor protein C-terminal signature | 810 | 823 | IPR004358 | GO:0016310|GO:0016772 | |
Adu07g00085 | 1144 | PRINTS | Bacterial sensor protein C-terminal signature | 769 | 779 | IPR004358 | GO:0016310|GO:0016772 | |
Adu07g00085 | 1144 | PRINTS | Bacterial sensor protein C-terminal signature | 786 | 804 | IPR004358 | GO:0016310|GO:0016772 | |
Adu07g00085 | 1144 | PRINTS | Bacterial sensor protein C-terminal signature | 751 | 765 | IPR004358 | GO:0016310|GO:0016772 | |
Adu07g00085 | 1144 | SMART | REC_2 | 1002 | 1136 | IPR001789 | GO:0000160 | |
Adu07g00085 | 1144 | CDD | HATPase_EvgS-ArcB-TorS-like | 661 | 824 | - | - | |
Adu07g00085 | 1144 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 654 | 825 | IPR003594 | - | |
Adu07g00085 | 1144 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Adu07g00085 | 1144 | ProSiteProfiles | CHASE domain profile. | 257 | 481 | IPR006189 | - | |
Adu07g00085 | 1144 | SMART | CHASE_2 | 257 | 456 | IPR006189 | - | |
Adu07g00085 | 1144 | Coils | Coil | 592 | 612 | - | - | |
Adu07g00085 | 1144 | SUPERFAMILY | CheY-like | 1002 | 1140 | IPR011006 | - | |
Adu07g00085 | 1144 | PANTHER | HISTIDINE KINASE 2 | 176 | 1141 | - | - | |
Adu07g00085 | 1144 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 596 | 821 | IPR036890 | - | |
Adu07g00085 | 1144 | ProSiteProfiles | Response regulatory domain profile. | 1003 | 1140 | IPR001789 | GO:0000160 | |
Adu07g00085 | 1144 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 176 | 1141 | - | - | |
Adu07g00085 | 1144 | SMART | HisKA_10 | 542 | 607 | IPR003661 | GO:0000155|GO:0007165 | |
Adu07g00085 | 1144 | Gene3D | - | 514 | 605 | - | - | |
Adu07g00085 | 1144 | Gene3D | CHASE domain | 261 | 488 | IPR042240 | - | |
Adu07g00085 | 1144 | Gene3D | - | 843 | 981 | - | - | |
Adu07g00085 | 1144 | Gene3D | - | 998 | 1143 | - | - | |
Adu07g00085 | 1144 | Gene3D | - | 607 | 828 | IPR036890 | - | |
Adu07g00085 | 1144 | CDD | HisKA | 542 | 603 | IPR003661 | GO:0000155|GO:0007165 | |
Adu07g00085 | 1144 | ProSiteProfiles | Response regulatory domain profile. | 850 | 980 | IPR001789 | GO:0000160 | |
Adu07g00085 | 1144 | CDD | REC_hyHK_CKI1_RcsC-like | 1004 | 1136 | - | - | |
Adu07g00085 | 1144 | Pfam | Response regulator receiver domain | 1004 | 1136 | IPR001789 | GO:0000160 | |
Adu07g00085 | 1144 | SUPERFAMILY | CheY-like | 845 | 978 | IPR011006 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu07g00085 | Adu-Chr7 | 848518 | 858387 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu07g00085 | 42 | 116 | Miscellaneous Gene Families | AT5G35750 | 34.667 | 6.80e-06 | 48.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Adu07g00085 | CHASE | 4.1e-35 | CL0165 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu07g00085 | K14489 | - | gmx:100805107 | 1631.69 |