Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00085 ATGTCTGTGAATAAAAGAATTTCAGGATCAAATGGGAGGTTGCAACCAAGCATGAAGTCATGGAAGGTCAATGAGCCTCTAAATGGGTCTAATTCTCCTCATAGGACAACATGGAGGAGGAAGCCCTTGCTCCTTTTGATTGTTTTTGGTGTTATCATAGCAAGTTTCGGGCTTTTCTTGAGTTTCAAGAATAGTGAGTATTTGATGAGCAAGGAGAAAGAAGCTGCTTGTGAAGAGAGTTCAAGAATCTTGCTACAAAGATACAACATTAGCAGGAAGCAGCTTCATGCTTTGGCTTCCCTATTCTCTGGATCAGATCAGAACATGCTGCAGTCATGGGAACTGCATGTCTCGGCAATTATGGACTATACAAGTTCATTAAATTTGGTTAAAGAGTACTGGTGGGTCCTTGTAGGAATTATAATATCATGCAATTTGTCTGGATTCTGTTTACTAAGAATTCAAAAGCAGAAGCTAGTTGAGGGACATCAAGTTGGTCATCAAAAGCAGCTGCGAGATTTATCCCGGAACCCTTTAAAGAGTGTTGGGACTTGGAGGAAATGGTCACTAGCTATATTCTTGTCACTTGGAATACTTTTTTCCATTTGGTTATTCTGTGACTTATACACCGACTTTAAGCAGACAAGAGAAGAAATGCTTACCAATATGTGTGACGAGCGTGCCCGTATGCTTCAAGATCAGTTTAATGTCAGCATGAACCATGTTCATGCACTGGCTGTTCTTGTTTCGACATTTCACCATGGTAAACATCCATCTGCAATTGACCAGAAAATTTTTGGAGAATATACCGAGACTACTGCATTTGAGAGACCACTTACTAGTGGTGTTGCTTATGCTAAGAAAGTTCTCCACTCTGATAGGGCTGAGTTTGAGAAGCAGCATGGGTGGACTATTAAGAAAATGGAAACAGAGAATGAAGCACTAGTCCAAGATTGTATTCCAGAAAAATTGGATCCGGCGCCCATTCAGGATGAATATGCACCGGTGATTTTTGCTCAAGAAACGGTTTCTCATATTGTGTCTATTGACATGATGTCAGGGAAGGAGGACCGTGAGAATATCTTGCGAGCAAGGGCAACAGGAAAGGGGGTTCTGACATCCCCTTTTAAACTTCTAAAATCAAATCACCTTGGTGTTGTACTTACATTTGCTGTTTATAACAGCAATGTTCCTGCAGATGCTACACCAAAGCAGCGAATCGAAGCTACTGTGGGGTACCTGGGTGCTTCATATGATGTTCGATCACTGGTGGACAAGCTTCTCCACCAACTTGCAAGCAAGCAAATAATTGTTGTAAATGTTTATGATACAACCAACGCATCTGCACCGATTACAATGTATGGTACTGATGTTGCTGATACTGGACTACTACGTATAAACAGTCTAGATTTTGGGGATCCACTTCGAAAACATGAAATGCACTGCAGGTTCAAGCAGAGGCCTCCTCTCCCTTGGAAAGCAATCAATTACTCGGTTGGCATATTTCTCATCGTTTTGCTTATTGGTTATATATATTATGTAGCCATAAAACGAATAGAAAAGGTGGAGGATGACACTCAAAAAATGGCGGAGCTGAAAGTTCGTGCTGAAGCTGCAGATGTTGCAAAATCTCAGTTTCTTGCAACAGTTTCTCATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGACACTGAACTTGATGAAAACCAGATGGATTATGCCCAAACTGCGCATAAGAGTGGTAAGGATCTTATATCAGTGATAAATGAGGTTCTTGATCAGGCTAAGATTGAGGCACGCAAGCTTGAACTTGAAGCTGTAGCTTTTGATCCACATGCTATTCTAGAGGAAGTTCTATCACTTTTCTCGGGAAAAGCTAAAGAAAAAGGAATTGAGTTGGCTGTTTATGCATCCAATGAAGTACCCAAAGTTGTCATTGGTGATCCTAAACGGTTCTGGCAAATAATTACTAATCTTGTTGGCAATTCACTCAAGTTCACTCATGATAAAGGACATGTGTTTGTCTCGATTCATCTGGCAAATGAAGTGAAGAACCCACTTCACAGTATGGATGCAGTGCTGAGGGAAGGCTTAGAGTTGGATCATGATTTGTCAGACAATACATATAATACATTAAGTGGGTTCGCTGTAGGAAACCGATGGAAAAGCTGGGCCAACTTTAAAAAGTTAAATAGTATGGATTTGATGGAAGAGCCTGAATTGATTCAATTACTAGTAACAGTTGAGGATACAGGTATAGGAATTCCTATTGATGCGCAAAGCCGTATATTCACACCTTTTATGCAGGCCGATAGTTCGACCTCTCGAACATATGGTGGAACTGGAATAGGACTGAGCATTAGTAAATGTCTTGTTGAGCTCATGAGAGGAGAAATTGGTTTTGTTAGTGAGCCTGGAACTGGCAGTACTTTTACATTTACTGCAACTCTCAGAAAAGGAGAAACCACATCTTTGGATGCAAAGTGGCAGAATTTCAGTACATTTGATTCACAGTTGCAAGGGTTGAGAGCATTAGTGGTAGATAGAAGAAAAATCCGAGCTGAGGTCACAAGATATTATCTACAGAGGTTGGGGATGTCGGTGGATGTTATGTCAAGTTTGAAATCTGCATGTTCTTGTCTAACTGGTTCTTGCAACATGAGAGTGTCGAAGCAGTTTGCGATGATTCTGATAGACAAGGATGCTTGGGATAAGGAAAGTAGCACCTTATACTCCATCAAGAAACAGAAAAAGAATGGCACCAATGGAGACCGAATAAACTTTCCAAAAGTTTTTCTCCTGGCCACACACCTTAGCCCGAACGAATGTGATGAGCTCAAGACAAATGGTGTCATTGATGATATATTAATGAAGCCTTTTTGGCTCAGTGTTTTGGTTTGCTCCTATAGAGAATCCCTTGGAATTGAAAAAAGGCAAATAAGTAGGAAGAAAGTATCCAAACTTGGGAATCTATTATTACAGAAAAGAATTTTGGTGGTTGATGATAATGCAGTGAACAGAAAAGTTGCAGAAGGTGTTTTACAGAAATATGGGGCAACAGTTACTTGTGTTGAGGGTGGCAGGGCTGCTCTACAGATGCTTAAGCCCCCGCACAATTTCGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGTTTTGAAGTGACAAGGCAAATCCGCATCCTAGAGAACGACGTAAATGAGAAAATTGCATGTGGGGAAGCATCAGCTGAAATGTTTGGGGATATCTTTTATTGGCACATTCCAATACTAGCAATGACAGCTGATGTAACTCAGGCTTCAAATGAAGAGTGCAAAAAGTGTGGGATGGATGGCTATGTGTCAAAGCCGTTTGAGGAAGAGCAGCTCTACACGGCCATGGCACGCTTCTTCAAGCCTAGTTCATAG 3435 0.4102 MSVNKRISGSNGRLQPSMKSWKVNEPLNGSNSPHRTTWRRKPLLLLIVFGVIIASFGLFLSFKNSEYLMSKEKEAACEESSRILLQRYNISRKQLHALASLFSGSDQNMLQSWELHVSAIMDYTSSLNLVKEYWWVLVGIIISCNLSGFCLLRIQKQKLVEGHQVGHQKQLRDLSRNPLKSVGTWRKWSLAIFLSLGILFSIWLFCDLYTDFKQTREEMLTNMCDERARMLQDQFNVSMNHVHALAVLVSTFHHGKHPSAIDQKIFGEYTETTAFERPLTSGVAYAKKVLHSDRAEFEKQHGWTIKKMETENEALVQDCIPEKLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARATGKGVLTSPFKLLKSNHLGVVLTFAVYNSNVPADATPKQRIEATVGYLGASYDVRSLVDKLLHQLASKQIIVVNVYDTTNASAPITMYGTDVADTGLLRINSLDFGDPLRKHEMHCRFKQRPPLPWKAINYSVGIFLIVLLIGYIYYVAIKRIEKVEDDTQKMAELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDENQMDYAQTAHKSGKDLISVINEVLDQAKIEARKLELEAVAFDPHAILEEVLSLFSGKAKEKGIELAVYASNEVPKVVIGDPKRFWQIITNLVGNSLKFTHDKGHVFVSIHLANEVKNPLHSMDAVLREGLELDHDLSDNTYNTLSGFAVGNRWKSWANFKKLNSMDLMEEPELIQLLVTVEDTGIGIPIDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVELMRGEIGFVSEPGTGSTFTFTATLRKGETTSLDAKWQNFSTFDSQLQGLRALVVDRRKIRAEVTRYYLQRLGMSVDVMSSLKSACSCLTGSCNMRVSKQFAMILIDKDAWDKESSTLYSIKKQKKNGTNGDRINFPKVFLLATHLSPNECDELKTNGVIDDILMKPFWLSVLVCSYRESLGIEKRQISRKKVSKLGNLLLQKRILVVDDNAVNRKVAEGVLQKYGATVTCVEGGRAALQMLKPPHNFDACFMDLQMPEMDGFEVTRQIRILENDVNEKIACGEASAEMFGDIFYWHIPILAMTADVTQASNEECKKCGMDGYVSKPFEEEQLYTAMARFFKPSS 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00085 1144 ProSiteProfiles Histidine kinase domain profile. 549 826 IPR005467 -
Adu07g00085 1144 Pfam CHASE domain 260 454 IPR006189 -
Adu07g00085 1144 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 530 608 IPR036097 GO:0000155|GO:0007165
Adu07g00085 1144 Pfam His Kinase A (phospho-acceptor) domain 542 606 IPR003661 GO:0000155|GO:0007165
Adu07g00085 1144 Gene3D - 67 108 - -
Adu07g00085 1144 Gene3D - 210 260 - -
Adu07g00085 1144 SMART HKATPase_4 654 826 IPR003594 -
Adu07g00085 1144 PRINTS Bacterial sensor protein C-terminal signature 810 823 IPR004358 GO:0016310|GO:0016772
Adu07g00085 1144 PRINTS Bacterial sensor protein C-terminal signature 769 779 IPR004358 GO:0016310|GO:0016772
Adu07g00085 1144 PRINTS Bacterial sensor protein C-terminal signature 786 804 IPR004358 GO:0016310|GO:0016772
Adu07g00085 1144 PRINTS Bacterial sensor protein C-terminal signature 751 765 IPR004358 GO:0016310|GO:0016772
Adu07g00085 1144 SMART REC_2 1002 1136 IPR001789 GO:0000160
Adu07g00085 1144 CDD HATPase_EvgS-ArcB-TorS-like 661 824 - -
Adu07g00085 1144 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 654 825 IPR003594 -
Adu07g00085 1144 MobiDBLite consensus disorder prediction 1 35 - -
Adu07g00085 1144 ProSiteProfiles CHASE domain profile. 257 481 IPR006189 -
Adu07g00085 1144 SMART CHASE_2 257 456 IPR006189 -
Adu07g00085 1144 Coils Coil 592 612 - -
Adu07g00085 1144 SUPERFAMILY CheY-like 1002 1140 IPR011006 -
Adu07g00085 1144 PANTHER HISTIDINE KINASE 2 176 1141 - -
Adu07g00085 1144 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 596 821 IPR036890 -
Adu07g00085 1144 ProSiteProfiles Response regulatory domain profile. 1003 1140 IPR001789 GO:0000160
Adu07g00085 1144 PANTHER TWO-COMPONENT HISTIDINE KINASE 176 1141 - -
Adu07g00085 1144 SMART HisKA_10 542 607 IPR003661 GO:0000155|GO:0007165
Adu07g00085 1144 Gene3D - 514 605 - -
Adu07g00085 1144 Gene3D CHASE domain 261 488 IPR042240 -
Adu07g00085 1144 Gene3D - 843 981 - -
Adu07g00085 1144 Gene3D - 998 1143 - -
Adu07g00085 1144 Gene3D - 607 828 IPR036890 -
Adu07g00085 1144 CDD HisKA 542 603 IPR003661 GO:0000155|GO:0007165
Adu07g00085 1144 ProSiteProfiles Response regulatory domain profile. 850 980 IPR001789 GO:0000160
Adu07g00085 1144 CDD REC_hyHK_CKI1_RcsC-like 1004 1136 - -
Adu07g00085 1144 Pfam Response regulator receiver domain 1004 1136 IPR001789 GO:0000160
Adu07g00085 1144 SUPERFAMILY CheY-like 845 978 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00085 Adu-Chr7 848518 858387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00085 42 116 Miscellaneous Gene Families AT5G35750 34.667 6.80e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu07g00085 CHASE 4.1e-35 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00085 K14489 - gmx:100805107 1631.69