Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00081 ATGCAGGCATCAGAGCATCATAGAAGTTCAAGTATGTACTATCAACCAATGCAGCAGGTTGAGGCATACTGCATGCCACAATATCAAGCTCTGAATCATCATCAGTATTACAATGATGGAGGCCATGGTATTGGAAGCAGATTCTCTAATCAAAGTTCTTCTGAAATTTACTGCACATTGGAGTCATCATCCGCAACCGGCAGTTTTAATGTTTACAATTCTCCTTCAACTGTTAGTTTCTCACCAAATGGTAGCCCAGTTTCTCTTCAAGATTCTCAATCTCAGTCATATCCACCTGACAATAACTATGGATCTCCTATGAGTGGTTCGTGCATAACTGACGATTTAAGTACCTTCAAGCACAAGCTGAGAGAGCTGGAGAGTGTGATGTTTGGTCCTGATTGTGATAATCTTGATAGTTATGACAGTTCATTCAAGGATGCAACTGATTTCATGTCATCCGAGATGGACAGTTGGAGACAAACAATGGTGGCAATTTCTTGCAAGAACTTAAAGCATGTACTCGTCGTGTGTGCCAAAGCGATTGCAGAGAATGATCTGCTAATGGCACAATGGTTGATGGATGAACTGAGGCAGATGGTGTCTGTATCTGGCGAACCGATTCAAAGGTTGGGAGCATACATGTTGGAAGGCCTAGTTGCACGGTTGTCTTCTTCCGGGAGTTCAATCTACAGAGCCTTGAGATGCAAGGAACCGGAAAGTGCTGAGCTCCTCTCCTATATGCACATACTCTATGAGGTTTGCCCCTACTTCAAATTCGGATACATGTCTGCGAATGGAGCAATCGCAGAAGCTATGAAGGATGAAGACAGAGTTCACATAATTGATTTTCAAATTTCTCAAGGGAGCCAGTGGATCACTTTGATTCAAGCTTTTGCAGCTAGGCCTGGAGGACCACCACACATCCGAATTACAGGTATTGATGATTCAACATCGGCTTATGCGCGCGGTGGTGGGCTGCACATTGTGGGAAAGAGGTTGTCCAAGCTTGCAGAGCATTTTAAAGTGCCATTTGAATTTCATGCTGCAGCTATATCTGGTTGTGATGTTCAGCTGCATAATCTTGGTGTTCGACCGGGCGAGGCATTAGCAGTGAATTTTGCATTCATGCTACATCACATGCCAGATGAAAGTGTCAGCACCCTGAATCATAGGGATAGGCTCTTGAGGCTGGTCAAGAGCCTATCCCCGAAAGTGGTGACATTGGTGGAGCAAGAATCCAACACCAACACAGCTGCATTCTTTCCACGTTTCCTCGAAACTATGGACTACTACACAGCCATGTTCGAGTCGATAGACGTGACTCTTCCGAGGGAACATAAAGAGAGGATCAATGTGGAGCAGCATTGCTTGGCAAGGGATTTGGTTAACATCATAGCATGTGAAGGGGTTGAGAGAGTGGAAAGACATGAAGTGCTTGGGAAATGGAGGTCAAGGTTTGCAATGGCTGGTTTTAGTCCTTACCCTTTGAGTTCATTGGTGAATGGTACCATCAAGAAACTGCTTGATAACTACAGTGATAGATATAGGCTTGAAGAGAGAGATGGAGCATTGTATCTTGGTTGGATGAATAGAGATTTGGTTGCCTCTTGTGCATGGAAATGA 1626 0.4428 MQASEHHRSSSMYYQPMQQVEAYCMPQYQALNHHQYYNDGGHGIGSRFSNQSSSEIYCTLESSSATGSFNVYNSPSTVSFSPNGSPVSLQDSQSQSYPPDNNYGSPMSGSCITDDLSTFKHKLRELESVMFGPDCDNLDSYDSSFKDATDFMSSEMDSWRQTMVAISCKNLKHVLVVCAKAIAENDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSSSGSSIYRALRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGKRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTLNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFSPYPLSSLVNGTIKKLLDNYSDRYRLEERDGALYLGWMNRDLVASCAWK 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00081 541 ProSiteProfiles GRAS family profile. 162 541 IPR005202 -
Adu07g00081 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 541 IPR005202 -
Adu07g00081 541 MobiDBLite consensus disorder prediction 82 104 - -
Adu07g00081 541 Pfam GRAS domain family 171 541 IPR005202 -
Adu07g00081 541 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00081 Adu-Chr7 802765 804390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00081 12 541 GRAS Transcription Factor Family AT5G48150 66.791 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu07g00081 GRAS 2.5e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00081 - - gmx:100808300 963.755