Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00080 ATGGTTTCCTCAGAAGAAACTGCAGATCACAATGTTCCTTATGCTATACCACTGCAGAGAGCAAGTCCTCATAGTGATATTACAGAATCACAAGGGATTCATGGAGCTGAAACCCCTTCGTCCAAGCAAAAGGAAGAAACAAGTATTCCTTCTGCTGTGGCTCAAAACAAAGTGAAGGATTCTGATGTTACTGCTTCTGCATTGCAATCAGATCGGCAACGAAGCACACACATTGCAGCATCAGTTGAAAAACTTGTGCAGAGCCCTGATACACCTTTCCGTGAAAAACGTCATCCATCACAATCTGGTCATGACAGTCCCTCAATAATACGTGAAAGGGTATCAAAAGATGGGTATAACTGGCGAAAATATGGCCAGAAAAATGTTAAAGGGAATGAATTTATAAGGAGCTATTACAAGTGTACGCATCCGAACTGCCAGGCAAAGAAACAGTTAGAGCAGTCAAACGATGGCCAGATTACAGATTCCATTTGCATTGGTCAGCATAATCATCCTAGGCCTCAATCCAGCATCACAAAGCCTGTTGGTCCTGTTCTTCCTGTTCTTGAAGAAGGACCAGACAAGCCCCGTGTCGCCAATGTAGAAGTTGAAGACAAATCATTGAATGAGCATGCAAGTGTACCTCAACAGATGAAGTTTTCACACTCCCTTCAGATTACAAATGTTCCTGCAGCTGATCTGATGAAAGCTGCACATTCACAACTGACCACAGCAAATGACGAGGTTCACAACAATGACTATCCTGACTCAAAACGGCAGAAGACAGACGATAGTAATATTGAAGTCAGTGTAGCTGACAAGTCAACTTGTGCGTCTCGTGTTGTCGTTCAAACTTCAAGTGAGGTTGATTTTGTAAATGATGGGTACCGTTGGCGCAAATATGGTCAGAAACTAGTTAAAGGAAATGCAAATCCCAGAAGTTATTATCGATGCTCTAGTCCCGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAGTTGTAATAACTACCTATGAGGGACAACATGATCATGAAATCCCGCCTGGAAGGACTGTCACTCATAATGCAGCTACAAATGCTCAAACAACAACCATTAATGGCAAGCCAGGAACCAATTCTGTATCAAATCCTGTTTCTACAGATACAAGAGGAAGCAGATCAAATGAGAAAGTAAATGGCAACTCAATTACTAAATCAGAGGCTGGTAAGAGTCCTGAAAGTAAATTAAATGGGCAACAACAACAAAAAAATGAAAATGCAGTTGCCAAACAGGATTCTGTTGGTGCTAACATCACATGCCAATCAAATTCTGAAGATCCATGTCGATCAAAATCAAACGAACAGCCGAAAGATGATGTAGAAACTAAATCAGAAGGAAAGAACGGATCCCCTAATCTGGTTGTTCATGATACTCCTGGTCAAGAAGGTCAACTCAAGAAGCAATCAGCATCTGATGCAGAAGCTGTCCAGAGCTAA 1491 0.4185 MVSSEETADHNVPYAIPLQRASPHSDITESQGIHGAETPSSKQKEETSIPSAVAQNKVKDSDVTASALQSDRQRSTHIAASVEKLVQSPDTPFREKRHPSQSGHDSPSIIRERVSKDGYNWRKYGQKNVKGNEFIRSYYKCTHPNCQAKKQLEQSNDGQITDSICIGQHNHPRPQSSITKPVGPVLPVLEEGPDKPRVANVEVEDKSLNEHASVPQQMKFSHSLQITNVPAADLMKAAHSQLTTANDEVHNNDYPDSKRQKTDDSNIEVSVADKSTCASRVVVQTSSEVDFVNDGYRWRKYGQKLVKGNANPRSYYRCSSPGCPVKKHVERASHDSKVVITTYEGQHDHEIPPGRTVTHNAATNAQTTTINGKPGTNSVSNPVSTDTRGSRSNEKVNGNSITKSEAGKSPESKLNGQQQQKNENAVAKQDSVGANITCQSNSEDPCRSKSNEQPKDDVETKSEGKNGSPNLVVHDTPGQEGQLKKQSASDAEAVQS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00080 496 SMART WRKY_cls 115 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g00080 496 SMART WRKY_cls 292 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g00080 496 MobiDBLite consensus disorder prediction 448 463 - -
Adu07g00080 496 Gene3D WRKY domain 107 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu07g00080 496 ProSiteProfiles WRKY domain profile. 110 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g00080 496 MobiDBLite consensus disorder prediction 1 111 - -
Adu07g00080 496 SUPERFAMILY WRKY DNA-binding domain 111 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu07g00080 496 Gene3D WRKY domain 279 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu07g00080 496 PANTHER WRKY TRANSCRIPTION FACTOR 1 2 463 - -
Adu07g00080 496 MobiDBLite consensus disorder prediction 464 496 - -
Adu07g00080 496 ProSiteProfiles WRKY domain profile. 287 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g00080 496 MobiDBLite consensus disorder prediction 243 267 - -
Adu07g00080 496 Pfam WRKY DNA -binding domain 116 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g00080 496 Pfam WRKY DNA -binding domain 293 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu07g00080 496 MobiDBLite consensus disorder prediction 251 267 - -
Adu07g00080 496 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 2 463 IPR044810 GO:0003700
Adu07g00080 496 SUPERFAMILY WRKY DNA-binding domain 284 352 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu07g00080 496 MobiDBLite consensus disorder prediction 367 447 - -
Adu07g00080 496 MobiDBLite consensus disorder prediction 23 82 - -
Adu07g00080 496 MobiDBLite consensus disorder prediction 367 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00080 Adu-Chr7 797998 801904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00080 101 367 WRKY Transcription Factor Family AT2G04880 50.549 2.90e-87 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu07g00080 WRKY 3.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00080 K18834 - gmx:100781219 528.48