Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00052 ATGGCATTCTTTGATTCCACTCCAAGCAGCCGAATTCTTAATAGAGCTTCTACTGATCAAAGTTCAGTGGACACTGAGCATTCTCCCTTCGAAGCATCTCTTTGGAGCAAGAAGGTATCTATTGAAAAGAAGAGACTACTTGCTGTTCATGAAGCTGGTCATGTTATGTTAGCTCACTTATTTCCTCGGTTTGACTGGCATGCATTTTCGCAGCTCCTGCCTGGTGGTAAGATAAAATGTGTTAGCCCACTCAATGATATTGATAAATATGTCAAAGCAACTATTGATAGGTATAAGAAATCATGTTCAGATTCATCTGGTGCTGGATCTGCTTCCGAGATTAATGCTCAGTATTACCAGCAAGAAGTAGAAAAACTGTGTGCCTAA 387 0.4031 MAFFDSTPSSRILNRASTDQSSVDTEHSPFEASLWSKKVSIEKKRLLAVHEAGHVMLAHLFPRFDWHAFSQLLPGGKIKCVSPLNDIDKYVKATIDRYKKSCSDSSGAGSASEINAQYYQQEVEKLCA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00052 128 Gene3D Peptidase M41 35 114 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Adu07g00052 128 PANTHER ATP-DEPENDENT PROTEASE 36 82 - -
Adu07g00052 128 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 36 82 - -
Adu07g00052 128 SUPERFAMILY FtsH protease domain-like 42 76 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00052 Adu-Chr7 485661 487851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00052 83 126 MADS-box Gene Family AT4G18960 57.143 1.29e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00052 K03798 - csv:101215439 84.3445