Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00022 ATGTTTGGAAACAAAACTGAAGGGAAAAAAAGGAAGACTGCAGAGGCAGCGCATGGGGTGCGTAAAGTGAAGAAGAAGCAAAGAAAGAAATGTGGAGAGAGCTGGGAGAAGTGGAAGGATCATATTCATAAAGCTCGTAAGTCGCAAGTTGAAGTTGGCGGAGTTACAGGGTTGCAGCCTGAGCTTCAAACTGCCGCTGCTGATTCCTTCTCAGATCATCCTCCTCATCGCCTCCAGACACGTGCTGCAAATGCAAATGAAAAAGGTGACAAGGCCTCCTTGATTCCTCACTCCAGACGGCCTGCACTCCCCTCTCTGCAAATACCCCCATGGTCACTAGATGCCGCATTATCTTCTTTCGCAAAGACGGATGGTCCTTCCCTCTCCAGTCCCATTTCTGCTTCCACATCCACCTCTTCTAGAGGACTTCCGCCAAGGCCGAATTCGGCCAGAGTCAGGCCTTCCATGAGAAGTATAATTCCTCAAGGGAACTTCAGGGCCAGAACTAGTCCCCGCGATGCTGAAAGGACGGTTCTCATTGTTCCTGATACTACCCTGTCAAATGCACTTTTGGATAAGCCTTCTACTTCAAGGACACTCTCTCTTAGTGGTAAAGGTTCATTCTCTCCATTGTCAAAGGTTGCCCACTCATTACCGGTTACTCCAATTGCATCTTTGGGTCAAGAAAGTGTACACGGCAGACATCTGGGATGTGCTTCTGATTTAAATACAATGGTTGTCAAGCAGCACATAACTCGATCACTTTCGGTTCCAGTGGATGCCAAAGCCACCAAATTGAGGTGCACTCAGTCTAGGGTCTTGATTCGTATCATTTCAGCCAGGCGGCATCTTGCAACTGTTGATGGAACTTCAACTGGTGATGCTTCAGTCATGGAGATTGCTATTGAGGATGCTACAGCAGATATTCCAGAGGAAGAAGCAGTTTGTAGGATTTGTTTGGCAGAGCTCGGGGAAGGAGAAAATACGCTTAAGATGGAATGCAGTTGTAAAGGTGATCTTGCGCTTGCTCATCAAGACTGTGCGGTAAAGTGGTTTAGTATTAAGGGCAACAGGACCTGTGATGTCTGCAAGCAGGATGTTCAAAACCTCCCGGTAACACTATTGAAAATTTATGATCGTCAACCCCCTGCCAGACAGCCATCAAATGTGCCACAACCAAGGGAAATAGCTTATTACAGGATCTGGAATGATATACCTGTACTTGTCTTGGTTAGCATGCTTGCTTACTTCTGCTTTTTGGAGCAACTACTGGTTTCAGATTTGGGTCCTCGAGCTCTCGCAATTGCGTTACCTTTCTCCTGTGTTTTGGGTCTCCTAACATCTATGATTGCGTCAACCATGGTGAGCAGGAGTTACGTATGGGCTTATGCTTGCTTCCAGTTCGCAATTCTCATCTTGTTTGCTCACGTATTTTTTAATATGCTTAATGTCAATCCAATTCTGTCGATCCTTCTTTCCTCATTCATTGAATTCGGGATGACAATAAGCATGAATTGTCTCCTTTCGGAATATGTTAGATGGAGAGCAAATAGGCAGAATCAAACACCCAATGAGAATGGTAACAGTCTACAGCAGCAGCATCAAGAACAAATAGAGCAACAAGAGCAACATCGATGA 1638 0.4567 MFGNKTEGKKRKTAEAAHGVRKVKKKQRKKCGESWEKWKDHIHKARKSQVEVGGVTGLQPELQTAAADSFSDHPPHRLQTRAANANEKGDKASLIPHSRRPALPSLQIPPWSLDAALSSFAKTDGPSLSSPISASTSTSSRGLPPRPNSARVRPSMRSIIPQGNFRARTSPRDAERTVLIVPDTTLSNALLDKPSTSRTLSLSGKGSFSPLSKVAHSLPVTPIASLGQESVHGRHLGCASDLNTMVVKQHITRSLSVPVDAKATKLRCTQSRVLIRIISARRHLATVDGTSTGDASVMEIAIEDATADIPEEEAVCRICLAELGEGENTLKMECSCKGDLALAHQDCAVKWFSIKGNRTCDVCKQDVQNLPVTLLKIYDRQPPARQPSNVPQPREIAYYRIWNDIPVLVLVSMLAYFCFLEQLLVSDLGPRALAIALPFSCVLGLLTSMIASTMVSRSYVWAYACFQFAILILFAHVFFNMLNVNPILSILLSSFIEFGMTISMNCLLSEYVRWRANRQNQTPNENGNSLQQQHQEQIEQQEQHR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00022 545 MobiDBLite consensus disorder prediction 84 105 - -
Adu07g00022 545 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 302 371 IPR013083 -
Adu07g00022 545 PANTHER OS02G0165000 PROTEIN 77 542 - -
Adu07g00022 545 SUPERFAMILY RING/U-box 312 367 - -
Adu07g00022 545 Pfam RING-variant domain 316 363 IPR011016 GO:0008270
Adu07g00022 545 MobiDBLite consensus disorder prediction 122 145 - -
Adu07g00022 545 MobiDBLite consensus disorder prediction 122 155 - -
Adu07g00022 545 MobiDBLite consensus disorder prediction 1 36 - -
Adu07g00022 545 CDD RING_CH-C4HC3_MARCH 316 364 - -
Adu07g00022 545 ProSiteProfiles Zinc finger RING-CH-type profile. 308 370 IPR011016 GO:0008270
Adu07g00022 545 MobiDBLite consensus disorder prediction 522 537 - -
Adu07g00022 545 SMART ringv_2 315 364 IPR011016 GO:0008270
Adu07g00022 545 PANTHER OS02G0165000 PROTEIN 77 542 - -
Adu07g00022 545 MobiDBLite consensus disorder prediction 522 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00022 Adu-Chr7 330215 335004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00022 299 370 C3H Transcription Factor Family AT2G37950 46.575 8.41e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00022 - - ahf:112765571 996.882