Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00013 ATGGAATATGGTGGCATAGTGCACAATGAAAATGGTGCGTTTGGGAGCTTGTCGGAGTCAGCGGTAGAGGCAGAAGTAGATTTGGTGGACGAGCTACTGGTGGAGGGGTGCTGGGTGGAGACAACTAGTGCAGGAGGGTGCTACAACTGGATGCATAATCCATCAGATGCAGTAGTGGCGCCGCAACCACAGTACTTGGAAATGCTGCAGCTGCAGCTGCAGGAGGAATCATCATCGTCGTCATCAGATCAGGAGAGCCTTGTGGGCAAGAGGTGGTGGATCGGGCCTACTAGGCCGGGCCCTTCATCATCTTCTTCTTCTTCCTCCTCGGTAAAGGAGAGATTAGTGGTCGCGGTCGGGTACTTGAAAGACTACACAAAGAACAACAATCTGCTCATTCAGATATGGGTGCCCCCACGGAGATCACCACTACCCCTTCCCCTTCCCCTTCCCCTTGATGTGCTCACCTTTCCCAACCCCAGCCCTAACCCTAACCCTAACCTATGCGTTCGCTTCTTGAGAAGCCATGAGTATTCTCATCATTATCAGGCGCAGCAGCACTACGATCTCCGTGGATCCATCGCCTTACCCGTCTTTGAACGAGGCACTGCCACGTGCCTTGGCGTCCTCGACATTCTCATCACCAACCACCTCAACCTCACCAACAACTATCGCCCTCAGCTTGATAATGTCTGCAACGCTCTCGAGGCTGTCGATTTTAGGAGCTCTCATCAGAACTTGAACGCGAATTTTATGCCGCCGGCCATAAAGGTGTATGAGGAGCTATACCAAGCAGCACTGAATGAGATAGTGGAGGTGTTGACATCGGTGTGCAAGACGCAGAATCTTCCTCTAGGGCTGACATGGGCGCCGTGCATCCAACAAGGAAAGTGTGGGTGCGGGCACTCATCGGCAATGTGCGTGTCCACGGTGGATACAGCGTGCTATGTGGGGGATCTGGAAATGCTGGGCTTCCAGGAGGCGTGCTCAGAGTACCACCTCTTCAAGGGGCAAGGCATAGTTGGCACCGCCTTCACATCAGCCAAGCCCTGTTTCGCAATCGACATAACAGCCTTCAGCAGAGCAGAATACCCGCTTTCTCACCTCGCTAACATCTTTGGCTTGCATGCCGCCGTCGCCATCCCCCTCCGCAGCCTCTACACCGGATCCGCTGACTTCGTCTTGGAGTTCTTCCTGCCAAAGGACTGCCATGACACCGAGCAGCAGAAGCACATGCTCAATTCCCTCTCCATGCTCGTCCAGCAAGCTTGCCGGAGCTTGCACGTTGCCACCGAAGACGACTTCACCCCTCCGATGCTCACTCATCATCAAGCGCAAGCACAAATAATGGAAGAGGCGTGCTCGAAGGATCAGTCGTGGATAGCGCACATGATGGAGGCGCAGGTGCAGCAGAAGGGGAAAGGGGTGTGCGTGTCGTTGGAGTACCAAATGGAAGAGCCCAAAGAGGAGTTCAAGGTGACAACCAACTGGGACACCGCCAACGACCAAGCCCATCACCAGCTGTTCTCCTCATCAGATTTCGGCCACATTGACGTGCTTGAGCACAGTAGGTCGAGGGCCAGCACTGCCGTGGACGGCGGCGAGGAGTCTTACGCCTTGGGTGGGCGGCGCTCCTCTTCTTCGGGTTCGGGCGGCAGGAAGTCAGGCGACAAGAGGCGAACCAAGGCTGAGAAGACTATCAGCCTGCCTGTCCTCAGACAGTATTTCGCCGGAAGCCTCAAAGACGCTGCCAAGAGCATTGGAGTGTGTCCCACGACTCTGAAAAGGATATGCAGGCAGCATGGGATAACAAGGTGGCCTTCCAGGAAAATAAAGAAGGTAGGGCACTCTTTGAAGAAACTTCAGCTTGTGATCGATTCGGTGCAGGGTGCAGAGGGTGCCATACAGATTGGCTCCTTCTATGCCAGCTTTCCCGAGTTAAGCTCCACAGATCTCTCTTCCCGTTCCGAATCATCACCATCCAAGAAAACCCACAGTACAACTATTCCTCATCAGAATCACAATAACAATACATTCTTGAAATCCCCACCCTCCTCTGCATGCAGCCAGACCTTAGATGTTGTCATGACAGAGAGCTCCGAGGCAGCATTGCTGCTCAAGAGAGCTCACAGCGAGGCGGCAGAGTTGCTGCAGCATGCATCCCTCCAATCACAAGAGGATACAAAGCATAATAGTTTCATCAGCAGCAGATCCAATAATAAGAGCCATCATCATCACTCTCAAGACAGAGACAAAGAAAGGGATCTTGAGGAGTGCAAGGACATACACAGATCATCTCAGAGCCGAACCATCCGCCTCTCACTTTTTCAAGCTTCCCCCCTCAATCATCTAGCAACAAACACTTTTGGCAATGGCACCACCAGCCCCTCCTAG 2394 0.5338 MEYGGIVHNENGAFGSLSESAVEAEVDLVDELLVEGCWVETTSAGGCYNWMHNPSDAVVAPQPQYLEMLQLQLQEESSSSSSDQESLVGKRWWIGPTRPGPSSSSSSSSSVKERLVVAVGYLKDYTKNNNLLIQIWVPPRRSPLPLPLPLPLDVLTFPNPSPNPNPNLCVRFLRSHEYSHHYQAQQHYDLRGSIALPVFERGTATCLGVLDILITNHLNLTNNYRPQLDNVCNALEAVDFRSSHQNLNANFMPPAIKVYEELYQAALNEIVEVLTSVCKTQNLPLGLTWAPCIQQGKCGCGHSSAMCVSTVDTACYVGDLEMLGFQEACSEYHLFKGQGIVGTAFTSAKPCFAIDITAFSRAEYPLSHLANIFGLHAAVAIPLRSLYTGSADFVLEFFLPKDCHDTEQQKHMLNSLSMLVQQACRSLHVATEDDFTPPMLTHHQAQAQIMEEACSKDQSWIAHMMEAQVQQKGKGVCVSLEYQMEEPKEEFKVTTNWDTANDQAHHQLFSSSDFGHIDVLEHSRSRASTAVDGGEESYALGGRRSSSSGSGGRKSGDKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLKKLQLVIDSVQGAEGAIQIGSFYASFPELSSTDLSSRSESSPSKKTHSTTIPHQNHNNNTFLKSPPSSACSQTLDVVMTESSEAALLLKRAHSEAAELLQHASLQSQEDTKHNSFISSRSNNKSHHHHSQDRDKERDLEECKDIHRSSQSRTIRLSLFQASPLNHLATNTFGNGTTSPS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00013 797 MobiDBLite consensus disorder prediction 651 684 - -
Adu07g00013 797 ProSiteProfiles RWP-RK domain profile. 553 634 IPR003035 -
Adu07g00013 797 MobiDBLite consensus disorder prediction 720 738 - -
Adu07g00013 797 Pfam RWP-RK domain 567 614 IPR003035 -
Adu07g00013 797 PANTHER PROTEIN NLP2 160 783 - -
Adu07g00013 797 PANTHER PROTEIN NLP2 29 139 - -
Adu07g00013 797 MobiDBLite consensus disorder prediction 524 564 - -
Adu07g00013 797 MobiDBLite consensus disorder prediction 742 767 - -
Adu07g00013 797 PANTHER PROTEIN NLP8 160 783 IPR045012 GO:0003700
Adu07g00013 797 PANTHER PROTEIN NLP8 29 139 IPR045012 GO:0003700
Adu07g00013 797 MobiDBLite consensus disorder prediction 720 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00013 Adu-Chr7 201892 205318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00013 11 653 NLP Transcription Factor Family AT4G35270 44.016 2.36e-178 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu07g00013 RWP-RK 4.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00013 - - aip:107633985 1366.29