Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00011 ATGGGAACTTGTTGGGGTTCTCCAAAATTACCACCCCACAACTGCAACCCAACCACCACCACCACCACCACCACCACCGGTAACCTCAGCGGAGGTACGGCATCAACGTCAACGTCAACGTCAACGTCAACGTTAACGTTAACCTCAACGGGGACATCCCGCGTCACGAGCAGCAGCTGCAGCTACACGACTTCGTCGGGAAGTGGGAACATCAGCTCCGTAAGCAAGTTCTCCGATGATCATTATCCCGACGGCCAGATCCTACCTGCCGCAAATCTCAGGATCTTCACCTTCGCAGAGTTGAAGGCTGCCACTAGGAATTTCAGACTTGACACCGTGCTTGGCGAGGGAGGTTTCGGCAAGGTCTACAAGGGGTGGCTCGAAGACAAGCCATCCTCCAAGAATGCAAATGGAACCGTCATTGCCGTCAAAAAATTGAACTCCGAAAGCTTACAGGGGCTTGAGGAGTGGAAGTCAGAAGTAAATTTTCTGGGACGCCTCTCTCATCCTAACCTTGTTAAGTTGTTGGGATACTGCTTGGAGGAAGCAGAACTTCTTCTCATCTATGAATTTATGCAGAAGGGCAGTTTGGAAAACCACCTATTCGGAAGGGGCTCTGCTGTTCAACCACTTCCATGGGATATTAGGCTTAAGATTGCAATCGGAGCAGCTCGTGGCCTTGCCTTCTTGCATACATCCGAGAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATACTGCTCGATGGGGCCTATAATGCAAAGATATCAGACTTTGGCTTGGCAAAACTGGGTCCTTCAGCTAGTCGCTCCCATGTGACAACTCGGGTGATGGGCACATATGGTTATGCAGCTCCTGAATATGTCGCTACAGGGCATCTGTATGTGAAGAGTGACGTGTATGCATTTGGAGTAGTTTTGGTGGAGATGCTAACAGGGCTACGAGCACTTGACGCAAACCGCCCAAGTGGGCAACATAATCTAACAGATTGGATCAAACCATACCTGCATGATAGAAGAAAGCTGAAAAGCATTATGGATTTTCGGTTGGAAGGAAAATATCCATCCAAAGTTGCATTTCGTATAGCTCAGCTTGCGCTGAGATGTCTTGAAACTGAGCCCAAACAGCGGCCGTCAATGAAGGAAGTTTTGGAGAGCTTGGAGCGATTTCATGCTGCCAATGAGAAACCTATGGAGCCCAAATCTGGTTCTAGTCATACTCATAGCCGTCGAGGTCAGCAAGCTGTGCACCATCGTTCTCCACTCCATCCATAG 1275 0.4902 MGTCWGSPKLPPHNCNPTTTTTTTTTGNLSGGTASTSTSTSTSTLTLTSTGTSRVTSSSCSYTTSSGSGNISSVSKFSDDHYPDGQILPAANLRIFTFAELKAATRNFRLDTVLGEGGFGKVYKGWLEDKPSSKNANGTVIAVKKLNSESLQGLEEWKSEVNFLGRLSHPNLVKLLGYCLEEAELLLIYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGAYNAKISDFGLAKLGPSASRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYAFGVVLVEMLTGLRALDANRPSGQHNLTDWIKPYLHDRRKLKSIMDFRLEGKYPSKVAFRIAQLALRCLETEPKQRPSMKEVLESLERFHAANEKPMEPKSGSSHTHSRRGQQAVHHRSPLHP 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00011 424 Gene3D Phosphorylase Kinase; domain 1 92 191 - -
Adu07g00011 424 SUPERFAMILY Protein kinase-like (PK-like) 85 387 IPR011009 -
Adu07g00011 424 Pfam Protein tyrosine and serine/threonine kinase 110 387 IPR001245 GO:0004672|GO:0006468
Adu07g00011 424 Gene3D Transferase(Phosphotransferase) domain 1 192 413 - -
Adu07g00011 424 MobiDBLite consensus disorder prediction 12 70 - -
Adu07g00011 424 MobiDBLite consensus disorder prediction 1 70 - -
Adu07g00011 424 ProSitePatterns Protein kinases ATP-binding region signature. 114 145 IPR017441 GO:0005524
Adu07g00011 424 ProSiteProfiles Protein kinase domain profile. 108 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00011 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Adu07g00011 424 MobiDBLite consensus disorder prediction 378 406 - -
Adu07g00011 424 CDD STKc_IRAK 114 390 - -
Adu07g00011 424 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 40 404 - -
Adu07g00011 424 MobiDBLite consensus disorder prediction 378 424 - -
Adu07g00011 424 PANTHER OS01G0588500 PROTEIN-RELATED 40 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00011 Adu-Chr7 174400 176932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00011 91 395 Receptor kinase-like Gene Family AT4G02010 50.485 5.79e-100 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu07g00011 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00011 - - gmx:100305417 622.468