Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00009 ATGAATAATCATCTGCCACAATGCCATGCATTAACAACATTAATACTGCTTCTATTATTGCATGGAGACGGAGCATCCAGCAGTGAGAGTGAAGTCGTCAAAATCGGTGCCATCTTCACATTAAAAACTATAAACGGGAGAGTTTCCAAAATTGCGATCCAAGCTGCTGAGAGGGACGTCAATGCAGATCCTCGCATCCTGGGGGGACGTAAATTGTCTATCACCGTCCATGACTCCAACTTCAGTGGCTTTCTTAGCTTCATTGGGGCCCTCAAGTTGTTGGTGACGGACACTGTAGCAATAATTGGTCCGCAAAGTTCGGTGATGGCCCATGTGCTTTCGCATCTTGCAAATGAGCTCCACGTCCCTCTACTCTCCTTCACGGCTCTTGATCCCACCCTGTCGCCTCTTCAGTACCCTTATTTCGTTCAAACTGCACCCAGCGATCAGTTCCAGATGACTGCGGTGGCAGACATGATTAGCTATTATGGTTGGAGAGAGGTCATTGCGGTGTTCAGCGACGATGATCAGAGTCGAAATGGCATAACTGTGTTGGGGGATAAGCTTGCAGAGAAACGCTGTAAGTTGTCTTATAAAGCAGCACTGCCCCCTGATCCAACGGCCAGCGCAAGCGATGTATCCTCTGAGCTGGCCAAGATTCAAAGTATGGAAGCTCGGGTGGTTGTAGTGCACACCTTTGCCCAAACAGGTCTCTTGGTTTTTGATGTGGCTCACAGACTAGGGATGATGAGGCAAGGCTATGTGTGGATAGCTACTACTTGGCTTTCAACTGTCTTAGATTCAACTTCAAACACCTCCAACTCTCTGGATATCCGGGGAGTTCTCACGCTTCGCCCTCACACCCCTCTGTCAAGACCAAAACAGGCATTCATCTCAAGGTGGAAGCACATTAGTAATGGCTCTGTTGGATTAAACCCATACGGACTCTACGCTTATGATGCTGTTTGGACCATTGCCCACGCATTGAAGCTATTCTTTGCTGAGAATGGGACCATCTCTTTCTCCAATAATACAAATTTTGGTGGTATGGCTGGTCTTGCTTCCTTGAGCATCTTTGATGGTGGGAACCAGTTACTCGATAACATACTTCGCATAAACACCACTGGATTGACAGGGCCGATTCAATTTGTTGGCTCAAACAGATCCCCCCTGCATCCATCCTATGACATCCTTAATGTACATGCCACTGGCTACAGGACTATTGGATACTGGTCCAATTACTCTGGCCTCTCTGTCACCACTCCCGAGAAACTTCACAGAAAGACATCCATCCGCTCTGTTTCAAACCAGCATCTATACAATGTGACGTGGCCTGGAAATACAAGGGAAAGGCCTCGTGGATGGGTTTTCCCCCATAGTGGGAGGCAACTCAGAATCGGGGTCCCCAACAGAGCCAGTTATCAAGGCATCGTCTCACAAATAAATGGGCCCCATGTAGTTCAAGGATACTGCATCGACATATTCCTCGCTGCCATCAAATTGCTTCCATATCCAATTCAATATAGGTTCATTCTGTTTGGAGAAGGACATAAGAATCCAAGCTACTATGATCTTGTCAACATGATTGCTTCGGATGTGTTTGATGCTGCTATAGGTGACATTGCAATTGTCACTGACCGAACAAAGATCGTGGATTTTACTCAACCATATATAGAGTCAGGTCTAGTTGTGGTTGCTCCGGTTCAAAGATTGAAGTCAAGTTCTTGGGCTTTCTTGAGACCATTTACTGCACCCATGTGGGGTGTCACTGCACTTTTTTTCCTTCTTATTGGAGCAGTGATCTGGATTCTTGAACACCGAACCAACGATGAGTTCCGAGGGCCTCCAAAGACGCAAATAGTGACTGTTCTTTGGCAAGCACGCTTGGCTTTTAAATTATTAGTCATACATTCCTTCCTCGCTTGTACTAGTCGGTTCAGTTTGTCAACATAA 1953 0.4644 MNNHLPQCHALTTLILLLLLHGDGASSSESEVVKIGAIFTLKTINGRVSKIAIQAAERDVNADPRILGGRKLSITVHDSNFSGFLSFIGALKLLVTDTVAIIGPQSSVMAHVLSHLANELHVPLLSFTALDPTLSPLQYPYFVQTAPSDQFQMTAVADMISYYGWREVIAVFSDDDQSRNGITVLGDKLAEKRCKLSYKAALPPDPTASASDVSSELAKIQSMEARVVVVHTFAQTGLLVFDVAHRLGMMRQGYVWIATTWLSTVLDSTSNTSNSLDIRGVLTLRPHTPLSRPKQAFISRWKHISNGSVGLNPYGLYAYDAVWTIAHALKLFFAENGTISFSNNTNFGGMAGLASLSIFDGGNQLLDNILRINTTGLTGPIQFVGSNRSPLHPSYDILNVHATGYRTIGYWSNYSGLSVTTPEKLHRKTSIRSVSNQHLYNVTWPGNTRERPRGWVFPHSGRQLRIGVPNRASYQGIVSQINGPHVVQGYCIDIFLAAIKLLPYPIQYRFILFGEGHKNPSYYDLVNMIASDVFDAAIGDIAIVTDRTKIVDFTQPYIESGLVVVAPVQRLKSSSWAFLRPFTAPMWGVTALFFLLIGAVIWILEHRTNDEFRGPPKTQIVTVLWQARLAFKLLVIHSFLACTSRFSLST 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00009 650 Pfam Ligated ion channel L-glutamate- and glycine-binding site 481 566 IPR019594 GO:0004970|GO:0016020
Adu07g00009 650 Gene3D - 148 417 - -
Adu07g00009 650 CDD PBP1_GABAb_receptor_plant 34 419 IPR044440 -
Adu07g00009 650 PANTHER GLUTAMATE RECEPTOR 3.1 18 626 - -
Adu07g00009 650 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 18 626 - -
Adu07g00009 650 SMART GluR_14 465 638 IPR001320 GO:0015276|GO:0016020
Adu07g00009 650 Gene3D - 576 643 - -
Adu07g00009 650 SUPERFAMILY Periplasmic binding protein-like II 442 588 - -
Adu07g00009 650 Pfam Receptor family ligand binding region 51 401 IPR001828 -
Adu07g00009 650 Gene3D - 459 575 - -
Adu07g00009 650 Gene3D - 51 392 - -
Adu07g00009 650 SUPERFAMILY Periplasmic binding protein-like I 28 456 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00009 Adu-Chr7 153998 157714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00009 14 625 Ion Channels AT4G35290 60.224 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00009 K05387 - gmx:100793969 992.26