Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00007 ATGGGCAACACATGCCGTGGATCTTTGAGAGGAAAATATTTTCAGGGCTTCAGCCAGCCCGAAGACCCCTCCAGGCGCAGCAATCCTTCTGACCCCTCCGACTCAGAGCACCTCCCCAAGCAGAATCCCAATTCAGCAGACAACAACAACAACAGCAACAACAACAACAACAACAACAACAACAACAACATCAACAACAACAAGAGAAATCTACCCTTCAAGAAGGACACCATCATGCGCAGAGGCCCCGACAACCAAGCTTATTATGTCCTGGGTCATAAGACTCACAACATTCGTGATCTCTACACTCTTGGCCGCAAACTGGGTCAGGGCCAATTTGGCACCACTTATTTATGCACCGAGAATTCCACCAACATCGAATACGCATGTAAATCCATCTCCAAGAGGAAGTTGATTTCCAAGGAGGACGTGGAAGACGTTAGGAGAGAAATTCAAATAATGCACCATTTAGCTGGTCACAAGAACATCGTCACCATCAAGGGTGCTTATGAGGATCCTCTCTACGTCCATATTGTCATGGAGCTTTGTTCTGGGGGTGAGTTGTTTGATCGCATCATCCAAAGGGGCCACTACACCGAGAGGAAGGCTGCTGAGTTGACCAAAATCATTGTTGGAGTTGTTGAGACTTGCCATTCCCTCGGGGTTATGCATAGAGATCTTAAGCCTGAAAACTTCTTGTTGGTTAATAAGGATGATGATTTCTCTCTTAAAGCAATTGACTTTGGCCTCTCTGTTTTCTTCAAACCAGGTCAAGTATTCACTGACGTGGTTGGCAGTCCGTACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGCCCCGAAGCAGATGTGTGGACAGCAGGCGTCATTCTATACATATTACTTAGTGGAGTGCCGCCGTTTTGGGCAGAAACCCAGCAGGGTATATTTGATGCTGTTTTGAAGGGGCATATAGATTTCGACTCTGATCCATGGCCTTTAATTTCTGATAGTGCTAAAGATCTGATTAGAAAGATGCTGTGTTCTCGGCCTTCAGAACGGTTGACAGCTCATGAAGTGTTATGTCATCCATGGATATGTGAAAATGGAGTTGCCCCCGACAGAGCATTGGACCCTGCTGTTCTTTCCCGCCTTAAACAGTTCTCTGCAATGAACAAACTAAAGAAGATGGCTTTGCGGGTAATTGCTGAAAGTTTGTCCGAAGAGGAGATTGCTGGTTTGAGAGAGATGTTTCAAGCTATGGATACTGATAACAGTGGTGCAATTACTTTTGATGAGCTTAAAGCTGGTCTAAGAAGATATGGGTCAACCCTTAAGGATACAGAAATACGTGATCTTATGGAGGCGGCTGATGTGGACAATAGTGGGACTATAGATTATGGAGAGTTTATCGCTGCAACAATTCATCTCAACAAGCTAGAGCGCGAGGAACATCTCATTGCAGCATTTCGATATTTTGACAAGGATGGGAGGAAGTTGATCAAGATAATGATGGAAGGATTGATTATGGTGTCTGATTCTCATCGGTGCAGGTTGTACAGCAAAATCCAGAAAGAGAAAAATAGCATGAATCTTTTATAA 1584 0.4457 MGNTCRGSLRGKYFQGFSQPEDPSRRSNPSDPSDSEHLPKQNPNSADNNNNSNNNNNNNNNNNINNNKRNLPFKKDTIMRRGPDNQAYYVLGHKTHNIRDLYTLGRKLGQGQFGTTYLCTENSTNIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVETCHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKDLIRKMLCSRPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFIAATIHLNKLEREEHLIAAFRYFDKDGRKLIKIMMEGLIMVSDSHRCRLYSKIQKEKNSMNLL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00007 527 SUPERFAMILY Protein kinase-like (PK-like) 84 384 IPR011009 -
Adu07g00007 527 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 497 - -
Adu07g00007 527 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
Adu07g00007 527 Gene3D Transferase(Phosphotransferase) domain 1 188 369 - -
Adu07g00007 527 SUPERFAMILY EF-hand 384 495 IPR011992 -
Adu07g00007 527 Pfam EF-hand domain pair 408 468 IPR002048 GO:0005509
Adu07g00007 527 MobiDBLite consensus disorder prediction 1 70 - -
Adu07g00007 527 CDD EFh 408 467 IPR002048 GO:0005509
Adu07g00007 527 ProSiteProfiles EF-hand calcium-binding domain profile. 403 438 IPR002048 GO:0005509
Adu07g00007 527 Gene3D Phosphorylase Kinase; domain 1 104 187 - -
Adu07g00007 527 SMART efh_1 407 435 IPR002048 GO:0005509
Adu07g00007 527 SMART efh_1 443 471 IPR002048 GO:0005509
Adu07g00007 527 MobiDBLite consensus disorder prediction 34 70 - -
Adu07g00007 527 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Adu07g00007 527 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Adu07g00007 527 ProSitePatterns EF-hand calcium-binding domain. 452 464 IPR018247 -
Adu07g00007 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Adu07g00007 527 CDD STKc_CAMK 102 359 - -
Adu07g00007 527 Gene3D - 370 506 - -
Adu07g00007 527 SMART serkin_6 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00007 527 Pfam Protein kinase domain 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00007 527 ProSiteProfiles Protein kinase domain profile. 102 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu07g00007 527 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 48 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00007 Adu-Chr7 116565 121861 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu07g00007 1 497 EF-hand Containing Proteins AT2G17290 81.113 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Adu07g00007 Pkinase 2.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00007 K13412 - gmx:100778173 860.907