Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu07g00003 ATGGATAACGAGGTGTTAGAATTTGATATTGGGCTGGAAGGAGGGGAGGGAGAATGCGAGGATGATGAGGGCGACATTGAGCACCCTATGGCTATGGCCATGGCTATCGAAGAGGATGAACTGGCTGATGCTGACAGAGGCAGAGGCACTGCCACTAGTGGTAGCGGTGGAGAAATTTACGTTCCTGAGGGTTTTGGTGCGGGTGACCTCTTAGATCTTGAACCTTACGAGGGCATGGAATTTGAGTCTGAGGAGGCTGCCAAGGCCTTCTACAATTCTTATGCCCGTCGTATCGGGTTCAGTACTCGGGTTAGCTCATCCCGGCGTTCCAGGCGCGATGGAGCCATCATACAGAGGCAATTTGTTTGTGCAAAGGAGGGTTTCCGCAACTTGAATGAGAAACGCACCAAGGATAGGGAGATCAAGCGTCCTCGAACCATTACCAGAGTCGGATGCAAAGCGGCTTTGTCGGTCAAAATGCACGACTCTGGCAAGTGGATCGTCTCTGGGTTTGTTAGGGAACACAACCACGAGCTTGTTCCACCGGATCAGGTGCACTGCCTTCGCTCTCACAGACAAATATCTGGAGCTGCCAAGACGCTAATTGATACTTTACAGGCTGCTGGAATGGGTCCTCGGAGAATTATGTCAGCACTGATCAAGGAGTGTGGTGGGATTAGCAAAGTTGGTTTTACAGAGGTTGACTGTAGGAATTACATGAGGAATAATAGGCAGAGAAGTCTAGAAGGCGACATTCAGCTTGTTCTGGATTATTTGAGACAAATGCATGCCGAAAACCCTTGTTTCTTCTATGCTGTGCAAAGTGATGAGGACCAGTCCATGAGCAATGTTTTCTGGGCCGATCCCAAGGCAAGGTTGAATTACACTTTTTTTGGTGATACCGTAACCTTTGACACTACTTACCGATCCAATAGGTATCGACTACCATTTGCTCCCTTTACTGGTGTAAACCATCATGGACAACCTGTTCTCTTTGGTTGTGCTTTCCTAATAAATGAATCTGAAGCATCATTTGTATGGCTTTTCAAGACGTGGCTTATGGCTATGTCTGGACGCCCACCATTATCAATAACAACCGATCATGATTCTGTAATTCGGTCAGCTGTACTACAAGTATTCCCTGAGACCCGCCACCGATTCTGCAAATGGCACATTTTTAAAAAATGCCAGGAGAAGTTATCTCACATTTTCCTCAAATATCCAAATTTCGAAGTTGAATTTCACAGATGTGTTAACTTGACGGAGTCAATTGAGGAATTTGAATCTTGCTGGTCAACACTCATCGATAGGTATGATCTGCGGGACCATGAATGGCTTCAAGCAATATATTCTGCTTGTAAGCAGTGGGTACCTGTATATTTGCGAGACACATTCTTTGCAGAAATGTCTATCACACAGCGAAGCGATGGCATGAACTCGTACTTTGATGGGTATGTAAATGCTTCAACCAACTTAAATCAGTTCTTCAAGTTGTATGAGAAAGCACTGGATAGTCGCAATGAGAAAGAAGTCAGAGCAGATTATGACACAATGAATAGTTCACCAGTTTTGAAGACCCCATCTCCAATGGAGAAGCAAGCATCTGAGCTTTACACACGAAAGATTTTCATGAGGTTCCAAGAGGAGCTAGTTGGGACGCTAACATTCATGGCATCCAAAACCGAGGATGATGGGGAGGTTGTTACATATCATGTAGCTAAATTTGGAGAGGATCATAAGGCATACTATGTTAAATTCAATGTTTTAGAGATGAAAGCGAGTTGTAGTTGCCAAATGTTTGAATTTTCCGGCCTTGTTTGTAGACATGTTTTGGCAGTGTTTAGAGTAACCAATGTACTCACTCTACCCGCTCATTATATATTGAAACGTTGGACGAGAAATGCCAAAAGCAGTGTAACATTAGAAGAACATTCTTGTGATATATATTCTTACTATTTGGAATCTCATACAGTTAGATATAATACCCTCAGACACGTGGCCTTTAAGTTTGTTGATGAAGGAGCAAAGTCTCCTGAGACTTATGATGTTGCAATGGGTGCTTTACAAGAAGCCACAAAAAGAGTTGTTCAAGTAATGCAAAGTGAGGGACGAATTCTCATCAACAATGGCAAAGTTAGGAGTCACTTGCAAATTGATGAAAGTCATACTAATTCCAGAAGTGGACACGAGGAAGGAAACTTGGGCCAGCATATGTCCGAGGATGACATGGACAAGAGCATTAGAGAACTTATGAATGAGCTTGAGTTTGCAAATCGAAAGTGTGAAATTTACCGGTCCAACCTGCTCTCAGTTTTGAAAGCTGTTGAGGATCATAAGTTAGAGTTGTCAATTAAGGTGGAAAACATCAAGATAAGCATTAAAGATGGCCTCTAA 2394 0.4336 MDNEVLEFDIGLEGGEGECEDDEGDIEHPMAMAMAIEEDELADADRGRGTATSGSGGEIYVPEGFGAGDLLDLEPYEGMEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKAALSVKMHDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKECGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHAENPCFFYAVQSDEDQSMSNVFWADPKARLNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLMAMSGRPPLSITTDHDSVIRSAVLQVFPETRHRFCKWHIFKKCQEKLSHIFLKYPNFEVEFHRCVNLTESIEEFESCWSTLIDRYDLRDHEWLQAIYSACKQWVPVYLRDTFFAEMSITQRSDGMNSYFDGYVNASTNLNQFFKLYEKALDSRNEKEVRADYDTMNSSPVLKTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKTEDDGEVVTYHVAKFGEDHKAYYVKFNVLEMKASCSCQMFEFSGLVCRHVLAVFRVTNVLTLPAHYILKRWTRNAKSSVTLEEHSCDIYSYYLESHTVRYNTLRHVAFKFVDEGAKSPETYDVAMGALQEATKRVVQVMQSEGRILINNGKVRSHLQIDESHTNSRSGHEEGNLGQHMSEDDMDKSIRELMNELEFANRKCEIYRSNLLSVLKAVEDHKLELSIKVENIKISIKDGL 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu07g00003 797 MobiDBLite consensus disorder prediction 720 740 - -
Adu07g00003 797 Pfam FAR1 DNA-binding domain 90 181 IPR004330 -
Adu07g00003 797 Pfam MULE transposase domain 302 395 IPR018289 -
Adu07g00003 797 ProSiteProfiles Zinc finger SWIM-type profile. 582 618 IPR007527 GO:0008270
Adu07g00003 797 SMART 26again6 593 620 IPR006564 GO:0008270
Adu07g00003 797 Coils Coil 740 767 - -
Adu07g00003 797 Pfam SWIM zinc finger 570 616 IPR007527 GO:0008270
Adu07g00003 797 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 763 IPR031052 GO:0006355
Adu07g00003 797 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 59 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu07g00003 Adu-Chr7 73652 77696 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu07g00003 MULE 6.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu07g00003 - - adu:107496170 1580.07