Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03286 ATGGCTGAACCCGCCGTCACCGACGCCGATAAAACAATCACCACCACCACATTGCCGTCGCTCAACATCGACGAATTATCGATCGACGAAAACAAGAAACCTCCGAAGCTATTAGACGATCCGGAAGACTCCAATATCCAAGCGGTTAGTTCTGACGACACGCCGTACACCTCGGCGGCGACGTTCGAGGAATTGAACTTGTCGGCGGAGCTTTTGAAAGGACTCTACGTTGAGATGAAGTTCCAGAAACCGAGCAAGATCCAAGCTATAAGCTTGCCGATGATCTTGAATCCGCCGCACCGTGATTTGATCGCTCAGGCTCACAACGGTTCCGGCAAGACCACGTGCTTTGTTTTAGGGATGCTTAGTCGTGTGGATCCTTCGACGCAAGCTACTCAAGCTCTCTGCATTTGTCCAACGAGGGAGCTTGCTATTCAGAACACTGAAGTTCTCCGGAAGATGGGGAAGCACACAGGGATTAGCTCGCACTGTGCCGTTCCGACGGATAGCAGGGATTCAATTCCAATTCAAAAAGGGGAGAAAATTAAGGCTCAGGTGGTTATTGGGACTCCTGGCACTATCAAGAAGTGGATTTCATTCAAGAAATTGGAGGTGACCAAATTGACGATTCTTGTCTTTGATGAGGCTGATCAAATGCTTGCTGAGGATGGTTTTAAGGATGATTCCTTGAGGATAATGAAAGAAATAGAAAAATCCAATTCTAGCTGCCAGGTTCTTCTATTTTCTGCCACATTCAATGACATTGTCAAGAACTTTGTTGAGAGGACAGTTAAAAAGGACCATAATAAACTTTTTGTTAAGAAAGAAGAGCTTTCTTTAGACGCTGTCAAGCAATATAAAGTGCAGTGCACTGATGAGTTGTCGAAGATTGAGGTGATAAAAGATTACATATTCGAGTTAGGAGAAAATGTGGGCCAAACCATCATATTCGTGCGCACGAGACAGAGTGCAAAAATGCTGCACAAGTCACTTGTCAATATGGGTTACGAGGTGACTTCGATACAAGGTGCTCCTGACCATGAAGAGAGAGACAAAATTGTCAAAGAGTTCAGAGATGGTTTGACTCAAGTTCTTATATCGACGGATGTTCTTGCTCGAGGCTTTGATCAGCAACAGGTCAATTTGGTTATCAACTATGATCTCCCAATAAAACATACTGCGGAGTATACACGGGAATTTGAGCCTGATTATGAGGTGTACTTGCACAGAGTTGGTAGGGCTGGTCGATTTGGCCGCAAGGGGGCTGTGTTTAACCTAATACATGATGAAAAAGATGAAAGGCTGATGTCAAAGATCGAGAACCATTTTGGCACCCGTGTATCAGAGGTACGAGAAAAAAGTGTCGAAGACTATAAAGCTGCACTTAAGGAAGCCGGTCTACTACAAGCATACTCagaactgaatcggtga 1431 0.4437 MAEPAVTDADKTITTTTLPSLNIDELSIDENKKPPKLLDDPEDSNIQAVSSDDTPYTSAATFEELNLSAELLKGLYVEMKFQKPSKIQAISLPMILNPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPSTQATQALCICPTRELAIQNTEVLRKMGKHTGISSHCAVPTDSRDSIPIQKGEKIKAQVVIGTPGTIKKWISFKKLEVTKLTILVFDEADQMLAEDGFKDDSLRIMKEIEKSNSSCQVLLFSATFNDIVKNFVERTVKKDHNKLFVKKEELSLDAVKQYKVQCTDELSKIEVIKDYIFELGENVGQTIIFVRTRQSAKMLHKSLVNMGYEVTSIQGAPDHEERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPIKHTAEYTREFEPDYEVYLHRVGRAGRFGRKGAVFNLIHDEKDERLMSKIENHFGTRVSEVREKSVEDYKAALKEAGLLQAYSELNR 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03286 476 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 60 89 IPR014014 GO:0003724
Adu06g03286 476 PANTHER DEAD-BOX HELICASE DBP80 39 448 - -
Adu06g03286 476 Pfam DEAD/DEAH box helicase 86 258 IPR011545 GO:0003676|GO:0005524
Adu06g03286 476 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 299 459 IPR001650 -
Adu06g03286 476 Pfam Helicase conserved C-terminal domain 296 418 IPR001650 -
Adu06g03286 476 Gene3D - 280 462 IPR027417 -
Adu06g03286 476 Coils Coil 467 476 - -
Adu06g03286 476 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 39 448 - -
Adu06g03286 476 SMART ultradead3 80 286 IPR014001 -
Adu06g03286 476 Gene3D - 38 277 IPR027417 -
Adu06g03286 476 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 94 270 IPR014001 -
Adu06g03286 476 MobiDBLite consensus disorder prediction 26 40 - -
Adu06g03286 476 CDD DEADc_DDX19_DDX25 67 266 - -
Adu06g03286 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 436 IPR027417 -
Adu06g03286 476 SMART helicmild6 325 418 IPR001650 -
Adu06g03286 476 MobiDBLite consensus disorder prediction 25 53 - -
Adu06g03286 476 CDD SF2_C_DEAD 283 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03286 Adu-Chr6 111332196 111335236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03286 26 450 Eukaryotic Initiation Factors Gene Family AT1G72730 35.402 2.25e-71 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03286 K18655 - gmx:100778091 696.041