Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03277 ATGGCCCTAACCTCATTAAGCTCAAAGTCTTGTGCAACCTTCTGGCTTTTCCTCCTCTTAGGTAATGTAGCATCAGCTACATTGTTTACCCTACAAAACAATTGCAAATACACTGTTTGGCCTGGAACACTTTCCGGCAATGACCCGACCATTCTTGACACCGGTCTTTCTCTAACATCCGGTTCTTTGGTCCAGATGACCGCCCCAGCTGGCTGGTCAGGACGATTCTGGGGTAGAACCGGATGTAACTTCGATATGGCTGGTAATGGCAAATGTGCCACCGGAGACTGTCCCGGTGGCCTCAAGTGCACTGGTGGAGGCGTTCCACCAGTGACACTAGTGGAATTCACCACCGGAAGTGCGACCAACGGCAACAAAGATTTTTATGACGTAAGCTTGGTGGATGGTTACAATGTGGCCATTGGAGTACGGGCAACCGGAGGAACCGGTAATTGTCAATACGCAGGTTGCGAAAATGACCTGAATGGTTACTGCCCAAAGGAGTTGCAAGTAAAAGATGATACGGGTTCGGTAGTAGCATGTAAGAGCGCGTGTGTGGCGTTTAACACCCCGAAGTATTGTTGCACCGGGGAGCACTCAACGCCACAAACGTGCTCACCTACGAATTACTCAAAGATGTTTAAGAATGCATGTCCAAGAGCTTATAGTTACGCTTATGATGATGCTTCAAGCACTTTTACATGCTCAGGTAATGTTGCATCAGCCACATTATTCACCCTACGAAACAATTGCAAATACAATGTTTGGCCCGGAAGTCTTTCCGGCAATGGCCCAAATATTCTTGACACCGATCTTTCTTTAAGACCCGGTTCTTCGGCCCAATCAAATGTTCCGGCTGGTTGGTCAGGACGTTTTTGGGCTAGAACCGAGTGTAATTTTGATAGGACCGGTAACGGCAAATGTGCTACAGGAGACTGTCTCGGTGGTCTCAAGTGTATCGGCGGAGGTGCTCCGCCGGTAACACTGGCCGAGTTCACGGTTGGAAGTGCCGGCAACGGCAATATGGATTTTTATGATGTGAGCTTGGTAGACGGTTACAATGTTCCTATAGGGATACATGCAACCGGAGGGACCGGTAACTGTCAATATGCTGGTTGCGTTTCTGACCTAAATGATAACTGTCCAAAGGAGTTACAGGTAAAAGATGTTACCGGTTTGGTAGTTGCATGCAAGAGCGCGTGTGCGGCATTCAACAGTCCGGAGTATTGTTGCACCGGGGAGCACGGAACACCACAGACATGCCCACCTACAAATTACTCAAAAATGTTTAAGATTGCATGTCCAAGAGCTTATAGTTATGCTTATGATGATGCTTCGAGCACTTGTACATGTTCTGGAGCAAATTACACCATCACTTTTTGCCCCACAGAATCCTCATAA 1401 0.4768 MALTSLSSKSCATFWLFLLLGNVASATLFTLQNNCKYTVWPGTLSGNDPTILDTGLSLTSGSLVQMTAPAGWSGRFWGRTGCNFDMAGNGKCATGDCPGGLKCTGGGVPPVTLVEFTTGSATNGNKDFYDVSLVDGYNVAIGVRATGGTGNCQYAGCENDLNGYCPKELQVKDDTGSVVACKSACVAFNTPKYCCTGEHSTPQTCSPTNYSKMFKNACPRAYSYAYDDASSTFTCSGNVASATLFTLRNNCKYNVWPGSLSGNGPNILDTDLSLRPGSSAQSNVPAGWSGRFWARTECNFDRTGNGKCATGDCLGGLKCIGGGAPPVTLAEFTVGSAGNGNMDFYDVSLVDGYNVPIGIHATGGTGNCQYAGCVSDLNDNCPKELQVKDVTGLVVACKSACAAFNSPEYCCTGEHGTPQTCPPTNYSKMFKIACPRAYSYAYDDASSTCTCSGANYTITFCPTESS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03277 466 ProSiteProfiles Thaumatin family profile. 26 246 IPR001938 -
Adu06g03277 466 Pfam Thaumatin family 249 462 IPR001938 -
Adu06g03277 466 Pfam Thaumatin family 33 237 IPR001938 -
Adu06g03277 466 PANTHER OS03G0233200 PROTEIN 240 463 IPR001938 -
Adu06g03277 466 PANTHER OS03G0233200 PROTEIN 14 238 IPR001938 -
Adu06g03277 466 ProSitePatterns Thaumatin family signature. 88 103 IPR017949 -
Adu06g03277 466 PANTHER PATHOGENESIS-RELATED PROTEIN 5-RELATED 240 463 - -
Adu06g03277 466 SMART tha2 245 462 IPR001938 -
Adu06g03277 466 SMART tha2 29 237 IPR001938 -
Adu06g03277 466 PRINTS Pathogenesis-related protein signature 244 256 IPR001938 -
Adu06g03277 466 PRINTS Pathogenesis-related protein signature 291 302 IPR001938 -
Adu06g03277 466 PRINTS Pathogenesis-related protein signature 304 333 IPR001938 -
Adu06g03277 466 PRINTS Pathogenesis-related protein signature 452 461 IPR001938 -
Adu06g03277 466 PANTHER PATHOGENESIS-RELATED PROTEIN 5-RELATED 14 238 - -
Adu06g03277 466 SUPERFAMILY Osmotin, thaumatin-like protein 28 237 IPR037176 -
Adu06g03277 466 SUPERFAMILY Osmotin, thaumatin-like protein 244 462 IPR037176 -
Adu06g03277 466 CDD TLP-PA 245 461 - -
Adu06g03277 466 ProSiteProfiles Thaumatin family profile. 242 462 IPR001938 -
Adu06g03277 466 ProSitePatterns Thaumatin family signature. 304 319 IPR017949 -
Adu06g03277 466 CDD TLP-PA 29 238 - -
Adu06g03277 466 Gene3D Thaumatin 244 462 IPR037176 -
Adu06g03277 466 Gene3D Thaumatin 27 243 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03277 Adu-Chr6 111209330 111213501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03277 231 466 Receptor kinase-like Gene Family AT5G38280 47.131 1.22e-55 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03277 - - adu:107495975 498.819