Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03206 ATGGCATTGGAGAATCTTCCTTTGATCATAAAGCTTAAAATTTCTTCCAAACGAAAGCTTGATGTAAATGAAAGCGTCGAGGTCAGGAGCATGGAGGAAGGCTTTCAGGGATCATGGCACCCGGGGAAAGTTGTCCATTCTGGGAGGCTGCAGCGCCATGTCAAATATGATAACATATTACTTGATGATGAGGTGAATTACCTTGTGGAAAAGGTGAGTATTCCGAAGGTATTGGATGGCGATAGCGACTCTTCAAATTGCAACATTCGTGGTTGGATTAGGCCGGTGCCTCCTAAGAGGGAATTTGAAAGTAGGGAACTTAAATTTGGTCTGTGTGTTGATGTGTACCATGAAGAAGCTTGGTGGGAAGGGGTTATATTTGATCACTGTGATGAAAAGCCAGAGAGGAGTGTATATTTTCCGGATTTGGGTGATGAGATGAAGATTGGAGTTCATCAAATGCGGATAACTTATGATTGGAATGAGGTTACTGGGGAGTGGCAGTCGAGAGGGAACTGGGTTTTTCTTGAAGTTCTTGAGGAGTATGAGAGGAAGATGTTTATTTCAGTTTCAGTGAAGCAAGTTTGGTATGATGTAAGGACCAAAAAGGACTTCGCCAAGATTAGGGAATGGACTTTTAATGAGAAAGTGTTATGGAAAAAAATGGTAATGGAGGTAGTTGATGATTACTTAAGGCTCATACTAGGAGAAGTTTGCTCCTCCTTAGATCTTCCAAGGAGTTTATTGAGAGAAACACCGGAGATGGAGTCTGTTGAATCTACTGCTAATGTTGACTTCAATCAGGCCAACTCTTTGGATGTTGCGAATTCTGCAGGCCAGTCGAGTAGCATTTGTATCACAACTGCTTCTGATGATGGGATTGCTGAACTCCCTATGGAAGGAGGTGAGTCATCGAATTTGTTGAACATGGATCAAAAGTGGCCTACCATTCAGGATCAAGGGGTCAAAACTGTCCCTCAGAAAGAACCAGTTACTCCTGTTCAAGAGGTCTCAACTCAGTTTCACAAAGAATGTGAAATATCCTGCGATGGTGCTACTGAAGTAATATTTAATGGAAGAAAACATAGAAAGCTTCGCAGCTCAACTCAACATTGGGAACCTCTCAGATTGTCTGACGTTGAGTTATGTCCTGATGCTATTGAAGAATATGCACAGGCCCCTAAAAGAGCTTGCCCGGAAAAAGCACGAAAACATCTTGCCCATCTTGGATGGAAAATTGAGTGGAGAAAGCATAAAACAAGCGACACTTGCTATAGGTACAGATATAGGTCGCCTGATAAACAGGGTGTTTACTACTCTCTCAGTCGGGTTTGTAAGTATGTGGCACAGAACCCTTTGCCGTCCCAAAATGATCAGAGTATGATGCAACTTACAGCTGACAATCATCTTGAACCTATTCTTATTGATCAATCAGAAAAGAGTCAGGATCAGAGTGCGATGCAACTTAGAGATGACAATCATCTTGCACCTATTTGTATTGATCAATCAGAAAAGAGTCATGATCTAAATATTTTGCCACCAATTGTGTCGTCTCCTGTGGATGAAGTTGCAGGTGAACCTGAGTTTTGTCCTCAAGCTGTTTTAGAATATAGCTTGAATAGATCTGCAATGCGAGGGCCTGACATGAAAGTGGGTAGGTCCAAAGCAAAGAGGCATCTATTGGCTGAAGGATGGAGCTATCACTATGCAAACCCAAGAAATAAAAGACAAGGGTTTGTGTATATCCCTCCAGACAAGGGAAGAAATCTCCCAACACTCCATGCAGCTTGCCATTATTGTATTGAACAAAATGTTGATAAATGGACCAAGCTCGGAATGCAACCTTTGAATGCACAGGATAATGTTGACCAGGTTTGGAGTGCCAATTTATTGCAGAAAGCGTCCCAATGGCTTCGAGAGGAACGCATGGTACCTCCCACAGAAGTCATAACTTCAAGTGGATCAAACCATAGTCGGAAGCGGAAACTCTTGAACAATACAAAGCCCAGCTTATCTAAGCACCAAAGAAATGGATTACCTCGACGCGTGCTGCGATCAAATAAAAGGGTGCAAAAGGTGTCTACCCCTTCTTTGTCACACCAGAAACCTCAGAATGTACTCTCTTGGTTGATAGACAATAACATTCTGTTGCCAAGGTCTAAGGTTTCTTACAAGCCAAAAGGCAGGCTCTGTTCAGCTGAAGGGAGAATAAGCAGAGATGGAATCAAGTGTAATTGTTGTTTGAAAGTATATAGTCTTGCTGGCTTTGAAAGTCATGCTAGTGGCTGTAGTACACGCAGACCGGCTGCAAGTATTATTTTAGAAGATGGTAGATCACTATTAGATTGCCTGATAAAAATGGTGGAAGATCATATGACAAGGGAAGCTATGGCAAAACCACCAAAATATTTTCCTAAAGGCGAGAATGACAATATTTGTTCTGTTTGCCACTATGGTGGGAATCTAATTTTATGCGATCAATGTCCATCTTCATTTCATGTGACATGTCTAGGTGTGGAGAACATTCCTGAAGATGACTGGTTTTGCCCATCATGTCGATGTGCAGTTTGTGGCGAAATAGAAGAAGAGGAGGGAGATTTCCTTGTTTGCATTCAGTGTGAACATAAATATCACTTTAAGTGCCTCAGAACTAAATATGCAACTAACTCGAGAAGATATAGTAAAAACTGGTTCTGCGGAAGGGACTGTGAAAAGATATATTTTGGTCTCCATAAGCTACTAGGAGAGCCAGTTTCAGTGGGCATTAACAATCTAACTTGGACATTGGTGAAATATATAAACTCTGAGAGTAGTGATCCGTGTACTACTAAAGGTTACTTATTGCCAGAAAGTTACAGCAAACTCAATGTTGCACTCTCAGTGATGCATGAATGTTTTGAGCCCCTAAAGGATCCTTCGTCTACCAGAGATCTCATGGAAGATGTTTTATTCAGTCGATGGTCAACACTTAATCGATTGAATTTCCATGGTTTCTATACCGTACTTCTGGAGAGAAATGAAGAACTGATAAGTGCAGCAACTGTTAGGGTTTACGGAAAGAAGGTAGCAGAATTGCCTCTTATTGGTACCAGATTACAGTATCGTCGACATGGAATGTGCCGCATTTTGATGAATGAGCTTGAAAAGACGCTCATGCAGTTGGGAGTGGAGAGGCTCGTTTTGCCTGCTGTTCCTAGTGTTGTAGACACATGGACTGGTTCTTTTGGCTTTGTAAAGATGACAGAGTTCGAGAGGTCGCAATTCTTGGACAATACTTTTTTAGATTTTCAGGATACCATTATGTGCCAGAAGCTGCTGAAGATTCCATCTCCAGAATCGGTTTTGTTAATAGAGTCCCAATCTGAAGTATTACACCAAACAGAAGAAACTGACAAAGGAGAGAAAAAGAATTCACAAATCCACAATAATTGTGCTGGAAGCAATGATCATTGCAGTAATGGTGCCATTGGCATTGAGCAAGTCACACCGGTGAATAAACCAAGTCCTGAGGATCCACCGAGCTCTATTGTAACACAAGCTGACAGGTTTCCAAAGCTACAGGGTGAAGGGTGTCAGCTAGGGATGGCAAAAATCCCGGCGGGACGGGTATCCGGGGGCATTTACCCGCCGGGGAGCAGTTCACTGCTTCGGAGACAGAGACGAGATGTCTCCTCTCCTCCTCACTCCTCAAAGGTGAAACCATCAGTCTCGTCTCCTCTCCTTTTCTTCTCGAACACCGCCGACCGCTGGCCACTGCGTCCCACCTTCTGGGTCTTCAGCGCCGCAGTCTCGTCTCCTCTTCTCTCCACTTTTCTCCACTTCTCCTCGAAGTTCAAACCCGCAGCCCCTCCTGTCTCCTTCTCGAACACTGCCGACCGCCGCCTTTCACCCTTTGGGTCCCTCAGCACCGCCTTCCAACCCCTAAGTGGCTCGTTCGCTCACTACAGGTCTCGATCTCACTCTCGCGGCCACGTCAACTTCTCCTCGTCGCGGTAG 3996 0.4364 MALENLPLIIKLKISSKRKLDVNESVEVRSMEEGFQGSWHPGKVVHSGRLQRHVKYDNILLDDEVNYLVEKVSIPKVLDGDSDSSNCNIRGWIRPVPPKREFESRELKFGLCVDVYHEEAWWEGVIFDHCDEKPERSVYFPDLGDEMKIGVHQMRITYDWNEVTGEWQSRGNWVFLEVLEEYERKMFISVSVKQVWYDVRTKKDFAKIREWTFNEKVLWKKMVMEVVDDYLRLILGEVCSSLDLPRSLLRETPEMESVESTANVDFNQANSLDVANSAGQSSSICITTASDDGIAELPMEGGESSNLLNMDQKWPTIQDQGVKTVPQKEPVTPVQEVSTQFHKECEISCDGATEVIFNGRKHRKLRSSTQHWEPLRLSDVELCPDAIEEYAQAPKRACPEKARKHLAHLGWKIEWRKHKTSDTCYRYRYRSPDKQGVYYSLSRVCKYVAQNPLPSQNDQSMMQLTADNHLEPILIDQSEKSQDQSAMQLRDDNHLAPICIDQSEKSHDLNILPPIVSSPVDEVAGEPEFCPQAVLEYSLNRSAMRGPDMKVGRSKAKRHLLAEGWSYHYANPRNKRQGFVYIPPDKGRNLPTLHAACHYCIEQNVDKWTKLGMQPLNAQDNVDQVWSANLLQKASQWLREERMVPPTEVITSSGSNHSRKRKLLNNTKPSLSKHQRNGLPRRVLRSNKRVQKVSTPSLSHQKPQNVLSWLIDNNILLPRSKVSYKPKGRLCSAEGRISRDGIKCNCCLKVYSLAGFESHASGCSTRRPAASIILEDGRSLLDCLIKMVEDHMTREAMAKPPKYFPKGENDNICSVCHYGGNLILCDQCPSSFHVTCLGVENIPEDDWFCPSCRCAVCGEIEEEEGDFLVCIQCEHKYHFKCLRTKYATNSRRYSKNWFCGRDCEKIYFGLHKLLGEPVSVGINNLTWTLVKYINSESSDPCTTKGYLLPESYSKLNVALSVMHECFEPLKDPSSTRDLMEDVLFSRWSTLNRLNFHGFYTVLLERNEELISAATVRVYGKKVAELPLIGTRLQYRRHGMCRILMNELEKTLMQLGVERLVLPAVPSVVDTWTGSFGFVKMTEFERSQFLDNTFLDFQDTIMCQKLLKIPSPESVLLIESQSEVLHQTEETDKGEKKNSQIHNNCAGSNDHCSNGAIGIEQVTPVNKPSPEDPPSSIVTQADRFPKLQGEGCQLGMAKIPAGRVSGGIYPPGSSSLLRRQRRDVSSPPHSSKVKPSVSSPLLFFSNTADRWPLRPTFWVFSAAVSSPLLSTFLHFSSKFKPAAPPVSFSNTADRRLSPFGSLSTAFQPLSGSFAHYRSRSHSRGHVNFSSSR 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03206 1331 SMART ring_2 854 906 IPR001841 -
Adu06g03206 1331 SMART ring_2 813 852 IPR001841 -
Adu06g03206 1331 MobiDBLite consensus disorder prediction 1209 1234 - -
Adu06g03206 1331 PANTHER PHD ZINC FINGER PROTEIN 13 1120 - -
Adu06g03206 1331 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 13 1120 - -
Adu06g03206 1331 Gene3D - 962 1105 - -
Adu06g03206 1331 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 955 1083 IPR016181 -
Adu06g03206 1331 SMART PHD_3 854 903 IPR001965 -
Adu06g03206 1331 SMART PHD_3 812 853 IPR001965 -
Adu06g03206 1331 SUPERFAMILY FYVE/PHD zinc finger 789 853 IPR011011 -
Adu06g03206 1331 SMART agenet_At_2 105 162 IPR014002 -
Adu06g03206 1331 SMART agenet_At_2 18 78 IPR014002 -
Adu06g03206 1331 CDD PHD2_CHD_II 813 852 - -
Adu06g03206 1331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 804 854 IPR013083 -
Adu06g03206 1331 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 961 1106 IPR000182 GO:0016407
Adu06g03206 1331 Pfam Agenet domain 24 98 IPR008395 -
Adu06g03206 1331 ProSiteProfiles Zinc finger PHD-type profile. 810 855 IPR019787 -
Adu06g03206 1331 Pfam Tify domain binding domain 735 786 IPR032308 -
Adu06g03206 1331 MobiDBLite consensus disorder prediction 648 678 - -
Adu06g03206 1331 CDD NAT_SF 1001 1061 - -
Adu06g03206 1331 SUPERFAMILY FYVE/PHD zinc finger 854 901 IPR011011 -
Adu06g03206 1331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 855 906 IPR013083 -
Adu06g03206 1331 MobiDBLite consensus disorder prediction 1126 1146 - -
Adu06g03206 1331 Pfam PHD-finger 812 854 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03206 Adu-Chr6 110391409 110400269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03206 29 450 PHD Transcription Factor Family AT5G58610 32.243 4.33e-62 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Adu06g03206 Agenet 1e-13 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03206 - - aip:107644722 2203.33