Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03162 ATGGCTGTGGAGTTTATAACCGGTTATGATCGTGGTGGTGATGGTGATCATAGTTTTGTCGGTAACAACGACGCGACGACGGCGGCAACAGTGGGAGAAGCAGCTTGTGGTGGCATTCAGCGTGTTGAGAAGCTCATGGACATGATTTCAGAACAAAAACATGAAGAAAATGATGATTATTCATCACTTGAAAAAGAAGAATTTGCAGGTGTTGTTGTTTCAATTCTTGACAACAACAAACCAAGAACAAGATTATTGGGCCATGCTCGTTTCAGAAGAGCTCCATCAACAACTACTCTTCTTCCTAATAATCTTCAATTGCAGCAAATGGATCATGAAAAAGAAACAATCAATGCAACAAGATTTTTTGAATTATCCAAAGAAAAAGATGGTTTTTCTCCACAACAAAGAAGTAAGGAGGAGCAAGTTTCTTCTTCTGCTTTCAAGCTTTATTGTCCTACATCAATTCTACCTCCTCTGCCTCAAAGGAAGAGCAATAATTACCATGATTACCCTTCAAGATTTTCCCATAATCAAAAGAACAATAATGTTGAAGCAAACAATGGCTCTTCTACAAGCATTGACTTTTCTACAACAAACTCTTATACTTACTTGTCAACGTTGACTAATAATATTGATGATGATCATAGCTTGCAAATTCAAAGGGTGTCACTTAATAAGGGTTCTTCTTCTTATATGCAAAAACCACCCTTATCCAATTCATCTTTGAATAAGAGGAAGTGCAATTCATTGGATAATAATGTTCAATCCTCCTCTTCAAAGTGCCATTGCTATAAGAAAAGGAAATCGAAGTTGAAGAGAGTGATTAGAGTGGCAGCAATTAGTTCAAAGACTGCTGATATTCCATCAGATGATTTCTCTGGGAGAAAATATGGTCAGAAACCTATTAAGGGCTCTCCTCACCCTAGAGGTTATTACAAATGTTCGAGCGTGAGAGGATGCCCTGCACGTAAACACGTGGAGCGTGCCGTAGACGATCCAAACATGCTTGTTGTAACTTATGAAGGAGAACACAATCATACATTAACACATGATGATTATGCTAATGATGCTGTTATCCTCCAATCATCTTAA 1095 0.3799 MAVEFITGYDRGGDGDHSFVGNNDATTAATVGEAACGGIQRVEKLMDMISEQKHEENDDYSSLEKEEFAGVVVSILDNNKPRTRLLGHARFRRAPSTTTLLPNNLQLQQMDHEKETINATRFFELSKEKDGFSPQQRSKEEQVSSSAFKLYCPTSILPPLPQRKSNNYHDYPSRFSHNQKNNNVEANNGSSTSIDFSTTNSYTYLSTLTNNIDDDHSLQIQRVSLNKGSSSYMQKPPLSNSSLNKRKCNSLDNNVQSSSSKCHCYKKRKSKLKRVIRVAAISSKTADIPSDDFSGRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPNMLVVTYEGEHNHTLTHDDYANDAVILQSS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03162 364 ProSiteProfiles WRKY domain profile. 284 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g03162 364 Gene3D WRKY domain 273 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g03162 364 PANTHER WRKY TRANSCRIPTION FACTOR NTEIG-D48 22 364 - -
Adu06g03162 364 MobiDBLite consensus disorder prediction 227 254 - -
Adu06g03162 364 Pfam WRKY DNA -binding domain 291 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g03162 364 SUPERFAMILY WRKY DNA-binding domain 285 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g03162 364 MobiDBLite consensus disorder prediction 159 192 - -
Adu06g03162 364 Coils Coil 46 66 - -
Adu06g03162 364 Pfam Plant zinc cluster domain 245 287 IPR018872 -
Adu06g03162 364 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 364 IPR044810 GO:0003700
Adu06g03162 364 SMART WRKY_cls 289 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03162 Adu-Chr6 109834858 109838043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03162 224 347 WRKY Transcription Factor Family AT2G24570 56.338 1.71e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu06g03162 WRKY 4.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03162 - - lja:Lj0g3v0162929.1 281.182