Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03087 ATGAGTAAGCTTCAGAGTGATGCACTGAGAGAAGCAATCATTGGGATAGTGGCTGATTCCAAAGAGAAGAATAGGAAGTTTATGGAGACCATTGAGCTCCAAATTGGACTCAAAAACTATGACCCACAAAAGGATAAGCGTTTCAGCGGTTCTGTAAAGTTGCCACACATCCCAAGGCCCAAGATGAAAATCTACATGCTTGGTGATGCTCAGCATGTTGAAGAGGTAAAGAAAATAGGATTGGATTGGATGGATGTTGAAGCATTGAAGAAGCTTAACAAAAATAAGAAATTGGTGAAGAAACTTGCCAAGAAATATCATGCTTTCTTGGCTTCTGAAGCAGTCATTAAGCAGATTCCTCGTCTCTTGGGTCCTGGTCTCAACAAGGCAGGAAAGTTCCCCACACTTGTTACCCACCAAGAATCCCTCGAGTCTAAAGTCAATGAGACCAAGGCTATGGTGAAATTTCAGCTTAAGAAGGTGCTCTGCATGGGAGTAGCTGTAGGCAATGTAAGCATGGAGGAAAAGCAAATCTTCCAAAACGTACAACTGAGCGTTAACTTCCTTGTGTCCTTGTTGAAAAAGAACTGGCAGAATGTTAGGTGCTTGTATCTGAAGAGTACCATGGGAAAATCCTACCTTGTCCCCGTCTGTCGGAGTGAGAGACTGCTGCCGCCGTCTGTCGCATTCAAGAACTTCCGTCTTCGTTCTCTCGGGCCTCTCGCCGGATCCTCCACGTCGGGTGCTCGCATCTCGCCGTTCTCCTCTGTGCTCGGCTGCTCGCGCCTCCCTTCGCCAGTGAGTGCTCGAGCTGTGCGTTCACTGGCATCTCGTGGTTCGTCTGTCTCGTCGCCGGCGGCAGAAGCAACTCGTGGGGGTGTCTCTTGCTTCGTCGCCTTCCGTGGGGTGGTCGCCGACTCGCCGTCAACCGTTGTTCAGCTTCACCAATCACCATTCTCATCGTTCATCAAGGTTCAGACTTCAGAGAGAAGGAGAGAACGCCATCACCCATCACGATCTCACCGGCGCACACGGCCACACGGCAGTGAGCTCCGTCGCGCAGTGAGCTCCGTCACCACTCGAGTCGGCGTTGCTGTATGTCTCCCACTCTCCCACTCTCCGTCACCATTCGACTCGGCGTTGAAGCCTGAAGGTTCCTTTCGAGCTTTGAGAGAAAGCCTTCGAGTTCCAGAGCAAGGAAATCATGAAGATGATGCTATTGTTTGA 1227 0.5012 MSKLQSDALREAIIGIVADSKEKNRKFMETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKIYMLGDAQHVEEVKKIGLDWMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYLVPVCRSERLLPPSVAFKNFRLRSLGPLAGSSTSGARISPFSSVLGCSRLPSPVSARAVRSLASRGSSVSSPAAEATRGGVSCFVAFRGVVADSPSTVVQLHQSPFSSFIKVQTSERRRERHHPSRSHRRTRPHGSELRRAVSSVTTRVGVAVCLPLSHSPSPFDSALKPEGSFRALRESLRVPEQGNHEDDAIV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03087 408 Gene3D - 20 211 - -
Adu06g03087 408 MobiDBLite consensus disorder prediction 334 348 - -
Adu06g03087 408 ProSitePatterns Ribosomal protein L1 signature. 116 135 IPR023673 -
Adu06g03087 408 CDD Ribosomal_L1 9 217 IPR028364 -
Adu06g03087 408 Pfam Ribosomal protein L1p/L10e family 22 210 IPR028364 -
Adu06g03087 408 MobiDBLite consensus disorder prediction 325 356 - -
Adu06g03087 408 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 212 - -
Adu06g03087 408 SUPERFAMILY Ribosomal protein L1 22 215 IPR023674 -
Adu06g03087 408 Gene3D - 65 154 IPR016095 -
Adu06g03087 408 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 2 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03087 Adu-Chr6 109038452 109046932 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03087 1 210 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 88.571 7.38e-120 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03087 K02865 - gmx:100808580 385.571