Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03074 ATGTTACTATATGGTATTAATAGCCATGTTATGCGGAGCATGGCTGAGAAGTGCATGAGGTGGATGGGTCCGTGGGGAGTGTGGAGCACTGGTGGGGGTAGCGGCGGCGGACGGTGCACTGCCGCCGGCAGTCACGTCAACAACCATAGCCACATCAACCCCGCAGCCCTGTCGCGTGTGGAAGTCCGGCACCGTGGCAGGAGCGTGAGGTCGTCTCATCTGTTGGAGCGCGCTCTCACTGTGTTCACCGTGCCTCTGTCACCGCCACCGTGTCCCCGTCACCGTCTCTTGTGTTCCGGCTTCCCTCCCCTACGTGAGTATTGCTGTGTGGTTTTGCGAGGTACAGAGTCCCGGGGGAAGTTTCGGCAGCAGAGACAGAGCCAATTTTTTTTAATGTCTTCTTGTAGCAGAATGGTCCATGAATTGGATGCAGAGGATGAAGAGAATTTTAACGTCTCCGAGGATAGCGAGAATTGTGATGCAACGGTTGTCTATGTGCAGGAGACGCTGGTGGATACAGGGATGGAGGCAGAGGCAGAGGAGTTGGAGATAGAATCACCGGATGAACGACATGGTGAGCAAAATGGCAGGGCTAAACATGTAATGCTAAGTCGTGCACAGATATTAGagatggagttcgctaactcggatgaggcgtgtcgtttctatgagcaatacagtcgagcaaagggttttgccatgcgacaagggaagaaaatgaagaataggaagggtgaaattgttcgctacacgtacctgtgcaatagagaaggatttagacatagaaaatggcttcagatgcaagatcgaaagagggagcacaaggttgtaacccgctgcgggtgtcaggctgagatgaggataaagcggaaagccgatagcaccagttggtatgtgtgtcgttttgtggatgagcataaccacgaccttcttccagcaaagtttgtgtcatacctaccagcttacaggaaaatatcagatgttgatgtagcccacatcgaaagtttgaggcaagttgggatctcaattccaaaaatttatgagtctattgctgcccaggcgggggggtttaacctagtttcattcacgaagagagatatgtataatgtggttaggcggcaacgtgcaatgcactgcggcgatgtgaatgccgcattacggtatttcaattcttgtgcaagggcagatgagaacatgtattggcaataccaggttggggatgagcaacaaatgtgtgatctgttttggagtaacggctgtagtcaacatgattacaaaatatttggtgatgttttggcatttgatgcgacgtatgggcggaacaagtacaatctgccggtgattgtgttttccggggtgaaccaccacaaccaaacatgtgtcttcggcgtagccatggtgtcttctgaaacacaagcggcatatgtgtgggtgttgggaaggtttttggagtgcatgggagggaaggctcctaaggcagttattactgatggggatagagcaatgcggcttgccattcaggaagtgtttccagaggctcatcacaggctttgtgcatggcacctactaaaaaatgcaactgtgaatgtgtgtaagcctcgcttcacaactctgcttagaaattgcatgctagctgatgttgaggttgaggagtttgagaggcaatgggatgcaatgatggatgaatgtggggtgtgggaagtagagtgggtaaaggatttatatgctaagaagatgtcatgggcaacggcgtacatacgtggatgcttttatgctgggctgaggacaacatctcggtgtgagtcactgcatgcaaaaatggggaggtttgtggaaaagcgatacggaatcttggagtttgtgacgaacttccaacggtgtgttgatttcctaaggaataatgaggaggagcttgactttaggtcgttgtatgggaggcccgtgctccaaactcagtttccagagctagagaagtctggtgcattgaactacacaaaggaaatatttgtgcgttttagagatgccctgaagagaagcgtgcggattactattgtagagtgcaacaaattggaagatcggacggtttatgtgacacagaagtatcgtaggccacaatttcggtggactgttgcccaccattttcgagaggattcctttttttgtagttgcatgagatttgagtcgttcggactaccttgtgtgcacatacttgcggtgttggtacagttggacatagattgtcttccaaaaagcatagtgttgaaacgctggtcaaagactgcaaaagttgagctggaggggtcttccctcatgaacgaagagggggatgcgaatgcagtatacaaggtgcgagtgggtgctttcctgcagcattgtaaacggctggcaagagttgcgtgtatgcgagagaatgatttcaagagttctttggagaagatagttgaagagaccattttcttggaaatgaagaatggtgttgggactgccggcaggtgtagcgttggtggtgcagaagaaggagtgcgcgatcccgtgacggttcggagtaagggaaccgggcgtggacaagagccttttgggtgtcggggaagaaagcggcgcaagtgcagcacctgtggtgtagttggtcatcgccgaactcgttgcccGAGCGGTCCAGCAAGTCAGCCAACATGTAGCCAAGACCCGACAGAAGATATTGTACCCCATAGTGAATCACAGAGCCATGCCCCGGTGGGCGGTGATGAAGACCAAAGCCAAAGAGGTAGCAAGACCGTGCGTGTGATTGCAAGCCCGTTGATCGATAACTAA 2811 0.1515 MLLYGINSHVMRSMAEKCMRWMGPWGVWSTGGGSGGGRCTAAGSHVNNHSHINPAALSRVEVRHRGRSVRSSHLLERALTVFTVPLSPPPCPRHRLLCSGFPPLREYCCVVLRGTESRGKFRQQRQSQFFLMSSCSRMVHELDAEDEENFNVSEDSENCDATVVYVQETLVDTGMEAEAEELEIESPDERHGEQNGRAKHVMLSRAQILEMEFANSDEACRFYEQYSRAKGFAMRQGKKMKNRKGEIVRYTYLCNREGFRHRKWLQMQDRKREHKVVTRCGCQAEMRIKRKADSTSWYVCRFVDEHNHDLLPAKFVSYLPAYRKISDVDVAHIESLRQVGISIPKIYESIAAQAGGFNLVSFTKRDMYNVVRRQRAMHCGDVNAALRYFNSCARADENMYWQYQVGDEQQMCDLFWSNGCSQHDYKIFGDVLAFDATYGRNKYNLPVIVFSGVNHHNQTCVFGVAMVSSETQAAYVWVLGRFLECMGGKAPKAVITDGDRAMRLAIQEVFPEAHHRLCAWHLLKNATVNVCKPRFTTLLRNCMLADVEVEEFERQWDAMMDECGVWEVEWVKDLYAKKMSWATAYIRGCFYAGLRTTSRCESLHAKMGRFVEKRYGILEFVTNFQRCVDFLRNNEEELDFRSLYGRPVLQTQFPELEKSGALNYTKEIFVRFRDALKRSVRITIVECNKLEDRTVYVTQKYRRPQFRWTVAHHFREDSFFCSCMRFESFGLPCVHILAVLVQLDIDCLPKSIVLKRWSKTAKVELEGSSLMNEEGDANAVYKVRVGAFLQHCKRLARVACMRENDFKSSLEKIVEETIFLEMKNGVGTAGRCSVGGAEEGVRDPVTVRSKGTGRGQEPFGCRGRKRRKCSTCGVVGHRRTRCPSGPASQPTCSQDPTEDIVPHSESQSHAPVGGDEDQSQRGSKTVRVIASPLIDN 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03074 936 Pfam FAR1 DNA-binding domain 221 312 IPR004330 -
Adu06g03074 936 MobiDBLite consensus disorder prediction 837 860 - -
Adu06g03074 936 ProSiteProfiles Zinc finger SWIM-type profile. 706 744 IPR007527 GO:0008270
Adu06g03074 936 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 206 778 IPR031052 GO:0006355
Adu06g03074 936 PANTHER OS02G0262500 PROTEIN 206 778 - -
Adu06g03074 936 MobiDBLite consensus disorder prediction 884 904 - -
Adu06g03074 936 Pfam MULE transposase domain 431 525 IPR018289 -
Adu06g03074 936 Pfam SWIM zinc finger 720 740 IPR007527 GO:0008270
Adu06g03074 936 MobiDBLite consensus disorder prediction 880 936 - -
Adu06g03074 936 SMART 26again6 719 746 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03074 Adu-Chr6 108882491 108890133 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g03074 MULE 2.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03074 - - ahf:112729678 1118.61