Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03040 ATGGTTTCTGCAGCCTCTCCAAGAATACCCACCGAGACGGTGAAGAACGCCGTGGAGGCTCTCCTGAAGTGGCGAGATTCCAATTCCGAGTCTCACAAACCCAAACTCTTCGACGCCGACGAAGAATTCGTTTACTTAGTCGTCACTCTGAAAACCATCCCTCACAAATCCCGCGTTAACTCTTACAAGGTCCCTTTACCCCACTCTCTCCTCTCTCCCTTCAACGAAACTTGCCTCATCATCGACGACAGGTCCAAATCCAAACTCACTAAACAAGAAGCTCAAAAGAAGATCAAGGCCGATAACGTCGCCGTTTCCAAGGTCCTCAGGCTGTTGGGGAAGAAATTCTTTAAGAAGAAGAAGGTGCCGGTGCAGGTGGACTTGATTAAGAAGAATTGGAAGGAGCAGGTGGATAAGGCGTGTTCGTCGGCGCTTCTGTTTCTTGGAACGGGGACTTGTTGTGTTGTGAAGGTTGCCAAGGTTTCCATGGAGAGCGAGCAGATTGTTGAGAATATGATGGCTGCCATTGAGGGGGTTGTTGAGGTTGTGCCGAAGAAGTGGGCGAATGTGAGGTCCTTGCATGTTAAGCTTTACGAGTCGCTGGCGCTGCCTGTTTTCCAGGCTGTTCCGGAGGTGAAGTTGAGGATTGAGGGAAGTAAGGTTGAGGAGGCGGAGAAAGAGAAGCAGACGATGGAGGAGGAGGAGGAGGAAGAGGGCGAAGACCATAGTGGCGCGAAGCGGTGA 744 0.5121 MVSAASPRIPTETVKNAVEALLKWRDSNSESHKPKLFDADEEFVYLVVTLKTIPHKSRVNSYKVPLPHSLLSPFNETCLIIDDRSKSKLTKQEAQKKIKADNVAVSKVLRLLGKKFFKKKKVPVQVDLIKKNWKEQVDKACSSALLFLGTGTCCVVKVAKVSMESEQIVENMMAAIEGVVEVVPKKWANVRSLHVKLYESLALPVFQAVPEVKLRIEGSKVEEAEKEKQTMEEEEEEEGEDHSGAKR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03040 247 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 6 238 - -
Adu06g03040 247 Gene3D - 145 197 - -
Adu06g03040 247 Gene3D - 88 144 IPR016095 -
Adu06g03040 247 Pfam Ribosomal protein L1p/L10e family 100 200 IPR028364 -
Adu06g03040 247 SUPERFAMILY Ribosomal protein L1 12 206 IPR023674 -
Adu06g03040 247 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 6 238 - -
Adu06g03040 247 MobiDBLite consensus disorder prediction 220 247 - -
Adu06g03040 247 Coils Coil 214 241 - -
Adu06g03040 247 CDD Ribosomal_L1 14 205 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03040 Adu-Chr6 108452670 108453522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03040 100 196 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 28.866 1.98e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03040 K14775 - ahf:112697689 405.216