Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03039 ATGAAGAAGGAACGTGCACCACGTCCGGGTGTAGTACGGCCAAGATTTAAACCCAATACACGTCCATACAACAAAAGCAAGCTTGATGCGGTTATACAACGCCTTAAACTTTTCAGAAACATCAAGGCCCGATTCAAATACAATTTGGATTTGGATATTTACAGCTCGCTTCTAAACAAAGTATTTAAGTACAGGACCGGAAGAAAGTCTATCACCCAACTGAGCTCAGATGCTGCTATACTTATGCGAGGCCATCCAGATCTTATTGACCAGTTTAACAAATGGATTCCCCGTACTCGTCAAGATTCATGTACGTTACTCTCGCACCACTTGGCAGCAACACATTTGGAGAACCGTGATCTACAGGATGAGGGCGATGATGAAGTATCTACGGATACTGATATTGATACAGATAGTGATGCTGAAGATTGGGACTGGTTGAAAAGGTCGACTAAGCTTGGTGGATGTACAGGCCCCTATAAAGTTTGGAAGATTTGGAAAAAGATCAAGGATCGGTTTAAGTGCGATATGGAGATTTGTGAGTCGCTAAAGGATAAGGTGGACAAGTACAAAGATGGAAGAAAGTCTATCATCCAACTAAGTTCCGACGTTGCTACACTTTTGCGGGGCCATCCCGATCTTATTGAGGAATTTCGCGAATGGATTCCCATCACTCCGAATGAGGGATCCGATGAAGTATCTAGCGATACTAGCTTTAGTACCACTGATACTGACGCCGATATATACAATGATACATCTTCAGATGCCATGGATTAA 777 0.4286 MKKERAPRPGVVRPRFKPNTRPYNKSKLDAVIQRLKLFRNIKARFKYNLDLDIYSSLLNKVFKYRTGRKSITQLSSDAAILMRGHPDLIDQFNKWIPRTRQDSCTLLSHHLAATHLENRDLQDEGDDEVSTDTDIDTDSDAEDWDWLKRSTKLGGCTGPYKVWKIWKKIKDRFKCDMEICESLKDKVDKYKDGRKSIIQLSSDVATLLRGHPDLIEEFREWIPITPNEGSDEVSSDTSFSTTDTDADIYNDTSSDAMD 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03039 258 ProSiteProfiles PAH domain profile. 149 225 IPR003822 GO:0006355
Adu06g03039 258 SUPERFAMILY PAH2 domain 37 97 IPR036600 GO:0006355
Adu06g03039 258 MobiDBLite consensus disorder prediction 225 258 - -
Adu06g03039 258 MobiDBLite consensus disorder prediction 228 258 - -
Adu06g03039 258 ProSiteProfiles PAH domain profile. 21 99 IPR003822 GO:0006355
Adu06g03039 258 Gene3D Paired amphipathic helix 166 223 IPR036600 GO:0006355
Adu06g03039 258 PANTHER - 37 132 - -
Adu06g03039 258 PANTHER - 166 226 - -
Adu06g03039 258 SUPERFAMILY PAH2 domain 167 223 IPR036600 GO:0006355
Adu06g03039 258 PANTHER SIN3B-RELATED 37 132 IPR039774 GO:0003714
Adu06g03039 258 PANTHER SIN3B-RELATED 166 226 IPR039774 GO:0003714
Adu06g03039 258 Gene3D Paired amphipathic helix 27 97 IPR036600 GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu06g03039 PAH 0.00018 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03039 - K11644 adu:107495749 262.692