Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03015 atggaatccTCATCTAGAGCTTCAGCCCGGTTTATCCCTGTGGCTACCGTAGAACCAATAACCTTGTCACGGAACGAAATCTTGGAAGTTACCCTAGGACTAAGTTTCATTAGTCTTGCGGCGTCGAATAAGTGTTCTCATTTTGTCCTTGGCCCAAGCTCGGGATCGAGTTCAAGTTCGGGGTTTCAGTTATTGAACTCTCCTTTCGGTGACACCACATACACCAAGGTTTTCGTCGGAGGGCTGGCATGGGAGACTCAAAGTGAAACCATGCGCCGCCACTTCGAGCAGTTTGGTGAAATTCTTGAGGCCGTAGTAATCACTGACAAGAACACCGGGAGATCCAAAGGATATGGTTTTGTGACTTTCCGGGATCCCGAGGCTGCTAGGAGAGCGTGTGCTGATCCAACTCCAATCATTGATGGTAGAAGAGCTAATTGTAACTTGGCTTCACTCGGTCGACCACGCCCTCCGCTGCCTTATGGACGGATAAGACCAGCCTCCCCATATGTTGGAGGTTTGCAACCAGCGAGAGGAGCCTTTTTGGGAAGTTTCGGCTACCAGCAACCAGTTTCATACGGCTATCAACAGGGGTTGGTTTATCCACCTTATGGGTATACAACGTATGGACCTGAATACGTCTACCCACAGAGTATGTACAATCCATATATGGGTCAGCACTACCTTCAGATATATGGAGTGCCTGCTGCAGCCATCAGATCGTGCCATATGGTGGATCTAATGTTAATGCCATGTCAACTTCACCTATGCCTGCCATTCAAACACCATATCCTAGCGGAATTGCTGCACCAGTTCCAGGCCAACCGCAATTTATTGTTCCTGCTCCTTCTCCACAGTTTATGCAAGGCAGTGGTCCTGACCAAACCGCTGGGTGAGGGGGCAAATAAGGTACCATTAGTGTGCAGCAGGACTAGAGCAGTGGAACTGCTACTTGAGTGGCGGGCTTCCAATCTAGCCTTGCAAGTTATTATTTTGCATTCTAGAGGTCATATATAG 1017 0.4828 MESSSRASARFIPVATVEPITLSRNEILEVTLGLSFISLAASNKCSHFVLGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPYGRIRPASPYVGGLQPARGAFLGSFGYQQPVSYGYQQGLVYPPYGYTTYGPEYVYPQSMYNPYMGQHYLQIYGVPAAAIRSCHMVDLMLMPCQLHLCLPFKHHILAELLHQFQANRNLLFLLLLHSLCKAVVLTKPLGEGANKVPLVCSRTRAVELLLEWRASNLALQVIILHSRGHI 338
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03015 338 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 77 133 IPR000504 GO:0003723
Adu06g03015 338 Gene3D - 53 159 IPR012677 -
Adu06g03015 338 CDD RRM_RBM24_RBM38_like 75 150 - -
Adu06g03015 338 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 75 152 IPR000504 GO:0003723
Adu06g03015 338 SMART rrm1_1 76 148 IPR000504 GO:0003723
Adu06g03015 338 PANTHER BOULE-RELATED 49 237 IPR037366 GO:0003729
Adu06g03015 338 PANTHER RNA-BINDING PROTEIN 38-LIKE ISOFORM X1 49 237 - -
Adu06g03015 338 SUPERFAMILY RNA-binding domain, RBD 55 164 IPR035979 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu06g03015 Adu-Chr6 108199892 108205894 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03015 64 211 C2H2 Transcription Factor Family AT2G19380 33.333 6.34e-17 79.7