Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g03013 ATGCCCAAAATGAAGCACCTCCTTCGAAAGCTTCACATCGGTGGCGCCACCACCGCCACTCCCACCACCGCCATCCACCACGTGCCGCCGCCGCCGCCGATTATCGCTCCCTCTACTTCTTCCGCTTCCTCTTCCGCTCTCCCCTCTCCCACTCCAATCGTCGTGGATCCAATTCCAAACCCTAGCAGCACCACCACCACCAGCATCAGCAACAGCGAAAACGGCGTCGTTAGTGATTTCGGTTTGTTGGAGGAAGAGGAGTTTCAGATGCAATTGGCTCTCGCGATCAGCGCCTCCGATCCCGATGTCCATAAGGACCCTGAATCTGCGCAGATCGATGCCGCTAAACAGATCAGCCTCGGATATGAAGCTTCTCTTTCTGATACTCAAGGACTCGTTCAGTTTCAGTCCCTTCGTTACTGGAACTATAATATCATTGGTTATGAGGAGAAAGTGATGGATGGATTTTATGATGTTTATGGCATCACATCAAATTTGACTGAACGGGGAAAGATGCCGTTGTTGGTGGATCTGCAAACTACACCAGTCTCAAGAAATATTGATTGTGAAGTGATTGTGGTGAATCGCACAGTTGATACTCAGCTGAAGCAGCTTGAAGAAAAAGCCTATGCTTTACTTAACGAGTGTGGTGTTTCTGAACTAGGACTAATCTTGAGCGGCTTACTTCAGAAACTTGCTGATATTGTTGTCAGTAAAATGGGTGGACCTGTTGGTAGTGCTGATAAAATTACAAAAAGCTGGGCTGTGAGGAGTCGTGAACTCCGAGATTCTTTAAGATCTATTGTTCTTCCCCTTGGCAGTCTTGATGTTGGACTTTCACGTCACCGAGCCCTACTTTTCAAGGTACTAGCTGATAGGATTAATATTCCCTGCATGCTTGTCAAAGGGAGCTATTACACAGGAACAGATGATGGAGCAGTGAATTTAATTAAAGCAGATGATGGAAGTGAATACATTATTGATATGATGGGTGCTCCTGGGGCTCTTATTCCAGCTGAGGTACCTAGTAATCAGCTCCAAAACTACAGCTTTGCTGTCAGGGGTTGTGCAGAACTTGTAGGGTTACCTAACACAACACATCCGCTGCTTGCTGATGAAACTGGAGTGCTGGGAATCCCATCTGAACTTGGCAAAATCTCAACCCCGAGGGTCCAGCCAGAAGAACTACTATTAAATATGGGCAGTCAAACAAAACCAGATAAAATACATCATGTTGAAGAAAATGATACAGAAGCATACAAATGCTCTTCACCTACAGAACCATCACCTGCAGAAAAGATCCGTGTAAATAATGTCTCCAAGTATGTCCTCAGTGCAGCAAAGAACCCGGAATTTGCTCAAAAGCTGCACACTGTTCTATTAGAGAGTGGTGCATTACCCCCTTCTGATCTTTTTTCTGATATGAATCTTCAGGATATGGGTGAGCATAAAGTAAATGTAAAAAATGTTGATGCTGTTCAAGCAGACCCAAATGGGTTGTTATTAAGCCATGAGAATTGTCTCATACCCTCTCAAGGGCTAGGCTGCGCCAATAATACTAGGTTATGTAAATCAGCTGACTGGTTAGCTGGACAGAAAAAAGAATTGCATACAGATGCCATTAGATTTTGTAACTCTTTACAGGGTGATAATACAAGGAAGGGGCTTGTAGCTGCTTCTGACAGGATTAATGGTTTAGAGCTATCTAATTCATTAATTGATTCACTTGCTGTCAATCCCCATAAGATGTGTAAAGAAAATTTTATCGAATCTTCTGAGCCCAAAGCAGCTGTTAATGGGTTTGACTTCTTTGGTGACGACGAAGAAAATAGTTTTCCAAATAAGGTTGAAGCAACTTGTAGCAACACTGGAAGGGGGACAGATTCATCCACTCAAATAAATGAGATGGTCAATGGAGGTGGTATACGACATGGTGGTAAAAGCAAGGAAGTTAATCCAGTACTTGGTGAAGGAACAGAATGGGAAATTCAATGGGAAGATCTCTCTGTTGGTGAGCGCATTGGTATTGGTTCTTATGGTGAAGTTTACCATGCCGATTGTAATGGAACTGAAGTTGCAGTGAAAAAGTTTCTCGACCAAGATTTCTCTGGTGATGCGCTAGCTCAGTTCAAATCTGAAGTTGAGATCATGTTAAGGCTGCGGCATCCTAATGTCGTGCTTTTCATGGGAGCAATTACTCGCTCTCCACATTTCTCAATCTTAACAGAGTTTCTTCCTAGAGGCAGCTTATACAGGCTATTACATCGGCCCAATGTTCGAATTGATGAGAAGCGGCGGTTGCGTATGGCTCTTGATGTGGCTAAAGGAATGAATTACTTGCACACAAGCAATCCTCCCATTGTCCATCGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAAGCATTGGGTTGTTAAGGTTTGTGATTTTGGTCTGTCACGGATGAAGCACCATACCTTTTTGTCATCAAAGTCTTGTGCAGGAACGCCTGAGTGGATGGCACCAGAAGTCTTGAGAAATGAACCAGCCAATGAGAAGTGCGATGTGTATAGTTTTGGCGTAATCTTGTGGGAGTTGGCTACCATGATGATTCCGTGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGGTTTCAAAATAAACGGCTTGAAATTCCAGACAATGTGAATCCTGCAGTTGCACAAATAATACGTGATTGCTGGCAAATGGAGCCACATTTGCGGCCATCATTTGCCCAGCTGATGTCTCGTCTCTCCCGTCTTCAACATCTGGTTGCCGGAATAGCGAGCTCCCCACAGTAA 2808 0.4427 MPKMKHLLRKLHIGGATTATPTTAIHHVPPPPPIIAPSTSSASSSALPSPTPIVVDPIPNPSSTTTTSISNSENGVVSDFGLLEEEEFQMQLALAISASDPDVHKDPESAQIDAAKQISLGYEASLSDTQGLVQFQSLRYWNYNIIGYEEKVMDGFYDVYGITSNLTERGKMPLLVDLQTTPVSRNIDCEVIVVNRTVDTQLKQLEEKAYALLNECGVSELGLILSGLLQKLADIVVSKMGGPVGSADKITKSWAVRSRELRDSLRSIVLPLGSLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGALIPAEVPSNQLQNYSFAVRGCAELVGLPNTTHPLLADETGVLGIPSELGKISTPRVQPEELLLNMGSQTKPDKIHHVEENDTEAYKCSSPTEPSPAEKIRVNNVSKYVLSAAKNPEFAQKLHTVLLESGALPPSDLFSDMNLQDMGEHKVNVKNVDAVQADPNGLLLSHENCLIPSQGLGCANNTRLCKSADWLAGQKKELHTDAIRFCNSLQGDNTRKGLVAASDRINGLELSNSLIDSLAVNPHKMCKENFIESSEPKAAVNGFDFFGDDEENSFPNKVEATCSNTGRGTDSSTQINEMVNGGGIRHGGKSKEVNPVLGEGTEWEIQWEDLSVGERIGIGSYGEVYHADCNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRLRHPNVVLFMGAITRSPHFSILTEFLPRGSLYRLLHRPNVRIDEKRRLRMALDVAKGMNYLHTSNPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATMMIPWKGLNPMQVVGAVGFQNKRLEIPDNVNPAVAQIIRDCWQMEPHLRPSFAQLMSRLSRLQHLVAGIASSPQ 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g03013 935 CDD STKc_MAP3K-like 674 920 - -
Adu06g03013 935 SUPERFAMILY Protein kinase-like (PK-like) 657 919 IPR011009 -
Adu06g03013 935 PRINTS Tyrosine kinase catalytic domain signature 742 755 IPR001245 GO:0004672|GO:0006468
Adu06g03013 935 PRINTS Tyrosine kinase catalytic domain signature 781 799 IPR001245 GO:0004672|GO:0006468
Adu06g03013 935 PRINTS Tyrosine kinase catalytic domain signature 828 838 IPR001245 GO:0004672|GO:0006468
Adu06g03013 935 PRINTS Tyrosine kinase catalytic domain signature 847 869 IPR001245 GO:0004672|GO:0006468
Adu06g03013 935 PRINTS Tyrosine kinase catalytic domain signature 891 913 IPR001245 GO:0004672|GO:0006468
Adu06g03013 935 Gene3D Phosphorylase Kinase; domain 1 661 745 - -
Adu06g03013 935 Coils Coil 195 215 - -
Adu06g03013 935 Gene3D Transferase(Phosphotransferase) domain 1 747 929 - -
Adu06g03013 935 ProSitePatterns Protein kinases ATP-binding region signature. 674 696 IPR017441 GO:0005524
Adu06g03013 935 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 73 929 - -
Adu06g03013 935 SMART serkin_6 668 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g03013 935 MobiDBLite consensus disorder prediction 36 71 - -
Adu06g03013 935 Pfam Protein tyrosine and serine/threonine kinase 669 920 IPR001245 GO:0004672|GO:0006468
Adu06g03013 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Adu06g03013 935 PANTHER SERINE-THREONINE PROTEIN KINASE 73 929 - -
Adu06g03013 935 Pfam Ethylene-responsive protein kinase Le-CTR1 134 337 - -
Adu06g03013 935 ProSiteProfiles Protein kinase domain profile. 668 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g03013 Adu-Chr6 108172569 108181710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g03013 567 926 MAP Kinase Kinase Kinase AT5G11850 69.167 2.12e-172 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Adu06g03013 PK_Tyr_Ser-Thr 7.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g03013 K04424 - gmx:100779137 1282.7