Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02980 ATGGAAAGAACACAAGACTACTTGAGATATTGCCTTCAAATAGCACAAGAGAATGGAATATTGGACCTTATTGTTCAACAACCTCCTCTCTCTCATGCTTTAAGCTCATCCTCCATTATTGCAAGCCCTCAAGTTCAAATCCCCACTTCTACTACTACTACTCATCTTGCTCGTATCATAGATCAAGCCAAAATCAATGGATGGTACATTGATCCTATTGAGATTCATTTGCAAGAGAAAATTGGGGAAGGAAGCACCGCAGACATATACAAGGGAAGATGGCGAGGATTTCAAGTGGCAGTGAAATGCATATCGCCAGAGTTCTTCCACACAAACCAAAACGGCGTCGTTTTCTTCGTTCAAGAACTCGAAACCCTCTCCAAACAACGCCATAGATTTGTTCTTCAGCTAATGGGTGCGTGCTTGGACCCTCCCCAACAAGCATGGATTGTAACCGAGTACTTAACCACCAATCTAAAAGAGTATCTGCATGGACCTGGCAATACAAGAAGCAAAGAGAGAGTGGTGCCACTCTCACCCTTTAGAGAGAGGATTGTCATGGCATTGGAGATTGCACAAGCCATGCAATATTTGCATCGCCAGAACCCTAAGATTATTCATCGTGATCTCAAACCTAGTAATATTTTTTTAGACGATGCGTTGCATGTTAGGGTTGCGGATTTCGGTCATGCCAGATTCTTAGGCGATCAGGAGATGGCTCTCACTGGAGAAACAGGAACATATGTGTACATGGCACCAGAGGTGATCCGATGTGAACCTTACAATGAAAAATGTGATGTATACAGTTTTGGAATCATACTCAATGAGCTTCTAACTGGAAACCATCCATACATTGAGACAGAATATGGTCCCACCAAGATTGCAATGGGAGTTGTGGAGGGTAAGCTGAGGCCAATGCTTCCATGTGATGATGATTCTAACCTAATGGAAGACCTAATTGACCTTATTAACCTTTGCTGGCATGCAAACCCATCAACAAGACCATCTTTTGAAGCTATCACACGTACCCTTGAAATTTATGTGAAGAAGCTCTATCAAACTATATCAACTCCTTAA 1077 0.4234 MERTQDYLRYCLQIAQENGILDLIVQQPPLSHALSSSSIIASPQVQIPTSTTTTHLARIIDQAKINGWYIDPIEIHLQEKIGEGSTADIYKGRWRGFQVAVKCISPEFFHTNQNGVVFFVQELETLSKQRHRFVLQLMGACLDPPQQAWIVTEYLTTNLKEYLHGPGNTRSKERVVPLSPFRERIVMALEIAQAMQYLHRQNPKIIHRDLKPSNIFLDDALHVRVADFGHARFLGDQEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGIILNELLTGNHPYIETEYGPTKIAMGVVEGKLRPMLPCDDDSNLMEDLIDLINLCWHANPSTRPSFEAITRTLEIYVKKLYQTISTP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02980 358 Gene3D Phosphorylase Kinase; domain 1 56 156 - -
Adu06g02980 358 CDD STKc_MAP3K-like 81 344 - -
Adu06g02980 358 PIRSF ILK 6 356 - -
Adu06g02980 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Adu06g02980 358 Pfam Protein kinase domain 76 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02980 358 SMART serkin_6 75 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02980 358 ProSitePatterns Protein kinases ATP-binding region signature. 81 102 IPR017441 GO:0005524
Adu06g02980 358 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 351 - -
Adu06g02980 358 Gene3D Transferase(Phosphotransferase) domain 1 178 357 - -
Adu06g02980 358 PANTHER OS09G0443600 PROTEIN 1 351 - -
Adu06g02980 358 ProSiteProfiles Protein kinase domain profile. 75 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02980 358 SUPERFAMILY Protein kinase-like (PK-like) 62 345 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02980 Adu-Chr6 107717454 107720537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02980 30 351 MAP Kinase Kinase Kinase AT2G17700 35.294 2.54e-52 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Adu06g02980 Pkinase 3.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02980 - - ahf:112757851 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02980 06 107717454 107720537 Adu06g02980 06 107717454 107720537 ECH