Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02969 ATGAAGTCAACAGGCCTTCACTTATTTTTTATATTCAATGGTCATCAATCATATCCCAACTTCTATCTATGTCCTGTTCCTAATTCCAAAGAAGAGAGTGAATTCAATTTGGAAATGGAGGAAGAAGAAGAATCAGAGAAGAAAAAATTGAAACAAGGTTCATTCCAGAGGCTATGTTTATCAGATGTAAGCAATTCAAGTTCATCACAAGCAATTGAAGATCTTTCAGTGTCACTAGCTGGATCAAAGCTTTATGCATTCACACTTGAGGAGTTAAGAGAAGCAACAAACAATTTCTCATGGAGTAACATGCTTGGTGAAGGTGGTTTTGGTCCTGTTTACAAAGGCTTCTTTGATGATAAACTTAGGCATGATTTGAAGCCTCAAACTGTTGCTGTTAAAAGATTGGACTTAGAAGGCTTGCAAGGTCATAAGGAGTGGCTGGCAGAGATTATATTTCTGGGGCAGTTAAGACATCCACATCTTGTTAAGTTAATTGGTTATTGTTATGAGGATGAAAACAGGCTTTTGGTGTATGAATACATGCCAAGAGGAAGCTTGGAGAATCAACTCTTCAGAAGGTACTCTGCTGCCATGCCATGGTCAACAAGGATGAAAATTGCATTAGGAGCAGCAAAGGGATTGGCCTTCCTTCATGGAGCAGATAAACCTGTAATATATAGGGATTTCAAAGCTTCAAATATCTTACTAGACTCGGATTTTACGGCGAAACTGTCGGATTTCGGTCTGGCTAAGGATGGACCTGAAGGGGAAGACACACATGTAACAACAAGAATCATGGGAACACATGGCTATGCTGCTCCTGAATACATCATGACAGGTCACCTTACAACCAAGAGTGATGTGTATAGCTATGGAGTTGTTCTATTGGAACTAATAACAGGAAAAAGGGTAGTGGACAAGTCCCTCACAAACAGAGGAAAAAGCTTGGTGGGGTGGGCAAGGCCTATGTTAAGAGACTCAAAGAAATTGAAGCAAATCATCGATAAAAAATTGGAAGGTCAATTCCCCATGAAAGGTGCCATGAAGGTTGCTTCTTTGGCTTATAGATGCTTATGTCACCATCCAAATCCAAGGCCTACTATGAGTGATGTTGTCAAGACATTGGAGCCACTCCAAGACTTTGATGATATTTTCTTGCGGCCATTTGTGTATGTTGCCACTAATCAAAATGGTAACATAGATACAAGGTAG 1215 0.3992 MKSTGLHLFFIFNGHQSYPNFYLCPVPNSKEESEFNLEMEEEEESEKKKLKQGSFQRLCLSDVSNSSSSQAIEDLSVSLAGSKLYAFTLEELREATNNFSWSNMLGEGGFGPVYKGFFDDKLRHDLKPQTVAVKRLDLEGLQGHKEWLAEIIFLGQLRHPHLVKLIGYCYEDENRLLVYEYMPRGSLENQLFRRYSAAMPWSTRMKIALGAAKGLAFLHGADKPVIYRDFKASNILLDSDFTAKLSDFGLAKDGPEGEDTHVTTRIMGTHGYAAPEYIMTGHLTTKSDVYSYGVVLLELITGKRVVDKSLTNRGKSLVGWARPMLRDSKKLKQIIDKKLEGQFPMKGAMKVASLAYRCLCHHPNPRPTMSDVVKTLEPLQDFDDIFLRPFVYVATNQNGNIDTR 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02969 404 CDD STKc_IRAK 105 379 - -
Adu06g02969 404 Gene3D Transferase(Phosphotransferase) domain 1 182 386 - -
Adu06g02969 404 Pfam Protein tyrosine and serine/threonine kinase 101 376 IPR001245 GO:0004672|GO:0006468
Adu06g02969 404 PIRSF ILK 17 60 - -
Adu06g02969 404 PIRSF ILK 89 384 - -
Adu06g02969 404 SUPERFAMILY Protein kinase-like (PK-like) 72 376 IPR011009 -
Adu06g02969 404 PANTHER KINASE 1B 38 401 - -
Adu06g02969 404 Gene3D Phosphorylase Kinase; domain 1 60 181 - -
Adu06g02969 404 PANTHER OS01G0588500 PROTEIN-RELATED 38 401 - -
Adu06g02969 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Adu06g02969 404 ProSiteProfiles Protein kinase domain profile. 99 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02969 Adu-Chr6 107528979 107531271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02969 87 376 Glycoside Hydrolase AT3G07070 53.242 2.10e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu06g02969 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02969 - - gmx:100802636 626.32