Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02962 ATGTCTACTACCATGACTACTACACCTAACATTGATTCAACCTTGCAAAACTCTACTTTGAACAGAGTCGTAGATTCTAGTTCAAGTAGTTGCAAGATGTACAAAGGTGTGAGGAAGAGGAAATGGGGCAAATGGGTATCGGAGATTAGGCTTCCCAACAGCCGAGAACGGATATGGTTGGGTTCTTATGACACCCAACAAAAGGCGGCTAGAGCCTTCGACGCCGCCCTCTACTGCCTTCGCGGCCGCCACGCCAGTTTCAACTTCCCCGACACGCCTCTTCATTTGGAGATCAACAATGTAAGTCACTACCATTCTCTCTCCCACCATGAAATTCAACAAGTTGCGTCCAAATTCGCCAATAATTTTGATGCTGAGGAAGAAGAGGAACCGTCATCACAAAATGGCGCTAATAGTGCAAGCTCTGTGTGTGATTATGATGGGAGTAATAATAATAATGATAATAACAACAACAATGATAATAATAACGTGCAAGTGGACCATGGGGACATGGATTGGACATTTTTGAACGTGTTGGATGATCAAAATGATTCCAATTTTGATAACACTATTGGCTATGATGTTGGCCTCTACTATGGAGGGATAGATAAGGTGTACTCAGGTGAATTTTTGTATACTACTACACCACCAACAACTTTTGAGGATAACAATAATGGTGATGCTGATGATGATGCTTTTTCTAACCATTCATTCCTTTGGAGTTGGAATTTTTGA 735 0.4177 MSTTMTTTPNIDSTLQNSTLNRVVDSSSSSCKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQQKAARAFDAALYCLRGRHASFNFPDTPLHLEINNVSHYHSLSHHEIQQVASKFANNFDAEEEEEPSSQNGANSASSVCDYDGSNNNNDNNNNNDNNNVQVDHGDMDWTFLNVLDDQNDSNFDNTIGYDVGLYYGGIDKVYSGEFLYTTTPPTTFEDNNNGDADDDAFSNHSFLWSWNF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02962 244 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Adu06g02962 244 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Adu06g02962 244 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Adu06g02962 244 MobiDBLite consensus disorder prediction 124 166 - -
Adu06g02962 244 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Adu06g02962 244 Pfam AP2 domain 34 82 IPR001471 GO:0003700|GO:0006355
Adu06g02962 244 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Adu06g02962 244 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 26 244 - -
Adu06g02962 244 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Adu06g02962 244 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF016 26 244 - -
Adu06g02962 244 MobiDBLite consensus disorder prediction 132 166 - -
Adu06g02962 244 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02962 Adu-Chr6 107459766 107460854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02962 26 147 AP2-EREBP Transcription Factor Family AT1G19210 59.016 1.99e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu06g02962 AP2 1.5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02962 - - gmx:112999363 230.335