Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02951 ATGGTTGCTCCTATCCCTAAGGTTGTACCCAATACTTCTTGCAAATCCAGTCCTAAAAAAAACAAAACATCCAAACGGCAATCACAGCCATCACACTCCAAAACTGCTAATCCTTCCAAGACAACTAAACCTCTCAAGAAGACCAACTCCCCAAAACCCACCAAGCCCACCAAGCTCACCAAACCCACCAAAATCAGCCAGCCCACGAAGCCCAGTCAGAACACTAAATCAGATAAGAGCAACAAGCAGAAACTGTCCAAGAGACCAAGTATTTCCAGGAGACCCTGTACACGGTCCGTTGCTAGAGGATTTAGTAGCAAAGTGTTTAACAATGAAGTTTCCTTTGATGTATCTTCTGACTCCTCTGACAGTGAAGAGGATAGCATGTTTAAGCCAGGTCCGGATGAGGGTAGTTCTTCTGATTCTGAGGCTACAGGGAATGATCCTAAAACTGGGAGTAGGATTAAGAGAAATATGACACATGCAGCGGTGGGTAAGAGAAATATTAATCCACTAGGTAAAGGGAAGGAGAAGATATTACATGAAGACGATGGTTTGGTGGAGGAGGTGAGTGATGCTGAAGTTGACCTTGGGTTTGTGGGTTGTGTTCATGAAGGGGCAGATGATGGACTAGACCCAGGTGTTGACTCAGATGGCACCAATTCTTGGCACTCGGAGGAGATGAAGATGCCTCCAAACTCAGAAGATAAGCTAGAGGAAGGAAATAAATCTGAAGAGGCAAGTCTGCTATTTAGGGAGGTTGCAAgGTTGATGGTTAGTTTTGCAGGGGAAATAATTTTGATGTTATGCTTATTTGAATTAATTGTGAGATCATTGGATATTAATGAAATAATTGGATGCTTTGGAATTGAGACCACGGTAGAGCACGGACGTCAATTCTACAATCTTTTCTTGGAGTATGCTCCTTACGGTTCTTTGGCTGACTTGATCCACAAGAAACCTCTCTCCGAGACCGAGGTGGGTGTCTATGTACGCATGATTGTTAAAGGGCTTTCACATATTCATCGCAAAGGAATCGTCCACTGTGACCTCAAGCCGGAGAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATTGCGAATTTTGGATTATCGAAAACCAAAGAGGAGAAAACAGATGTTGAGTTGTGGAAGTCCAAGCCGAGAGGTATGCCGTCATACTTGTCGCCGGAAGCGTTTTCTGGTCATATTGATGCTCCAATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGCTCACTGGCCTGCCTGGGGTGAGAGCCCTTTACTTATTGAGGAGGCCTGATGGCTATGCCGTAGGGTTTCTTGGGTCAGGCCGTCTTCTTTCCCTTGATGGCTTTGCCGAAAAGGAGTTGGAGTGGGGCGCGTTGCACCTGAGTGCTTGCCAACAAAACGAACTTGGGGTTCACTACCATTCTTGTTCCATGATGTTACCATGTGATATCTCCTTTGCTTCATGGACGCAACATTGGATGTGTTGGACGTTTGCATCCAAATTCCATAGCATAGGTAACTTGTCGTACACTATCCTTCTTAGGATTTACAATGATACAAGCCCATTAACAACAGCTGCTACTTCCGGCCCAATACAAGAAGCTGAAAGCGATGAGAAAGCAATTGGGTCAAAGAAACCGTTAGCTGAGCAGAGAAACAAGCGTGTGAAGAAGCAACCAGCTTGGATGAAGGACTACAGTGCTTCTATTCATCCAAACTGGTTCTTTCTTCACACGCTTGTTTCTCTGCTCAACTAA 1797 0.4435 MVAPIPKVVPNTSCKSSPKKNKTSKRQSQPSHSKTANPSKTTKPLKKTNSPKPTKPTKLTKPTKISQPTKPSQNTKSDKSNKQKLSKRPSISRRPCTRSVARGFSSKVFNNEVSFDVSSDSSDSEEDSMFKPGPDEGSSSDSEATGNDPKTGSRIKRNMTHAAVGKRNINPLGKGKEKILHEDDGLVEEVSDAEVDLGFVGCVHEGADDGLDPGVDSDGTNSWHSEEMKMPPNSEDKLEEGNKSEEASLLFREVARLMVSFAGEIILMLCLFELIVRSLDINEIIGCFGIETTVEHGRQFYNLFLEYAPYGSLADLIHKKPLSETEVGVYVRMIVKGLSHIHRKGIVHCDLKPENILVFPSLDKEIANYQLKIANFGLSKTKEEKTDVELWKSKPRGMPSYLSPEAFSGHIDAPMDIWALGCIVIEMLTGLPGVRALYLLRRPDGYAVGFLGSGRLLSLDGFAEKELEWGALHLSACQQNELGVHYHSCSMMLPCDISFASWTQHWMCWTFASKFHSIGNLSYTILLRIYNDTSPLTTAATSGPIQEAESDEKAIGSKKPLAEQRNKRVKKQPAWMKDYSASIHPNWFFLHTLVSLLN 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02951 598 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 277 432 - -
Adu06g02951 598 SMART serkin_6 166 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02951 598 MobiDBLite consensus disorder prediction 138 153 - -
Adu06g02951 598 MobiDBLite consensus disorder prediction 1 176 - -
Adu06g02951 598 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 277 432 - -
Adu06g02951 598 MobiDBLite consensus disorder prediction 28 79 - -
Adu06g02951 598 SUPERFAMILY Protein kinase-like (PK-like) 276 434 IPR011009 -
Adu06g02951 598 MobiDBLite consensus disorder prediction 103 118 - -
Adu06g02951 598 MobiDBLite consensus disorder prediction 208 241 - -
Adu06g02951 598 MobiDBLite consensus disorder prediction 540 567 - -
Adu06g02951 598 MobiDBLite consensus disorder prediction 551 567 - -
Adu06g02951 598 Gene3D Transferase(Phosphotransferase) domain 1 268 440 - -
Adu06g02951 598 ProSiteProfiles Protein kinase domain profile. 189 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02951 598 Pfam Protein kinase domain 275 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02951 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02951 Adu-Chr6 107205718 107215064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02951 280 430 MAP Kinase Kinase Kinase AT4G36950 48.701 9.39e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Adu06g02951 Pkinase 2.2e-31 CL0016