Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02950 ATGGGTTGTGAGATGGAATTGGAGAGTGAATGTATTGAGGACATGGAAGTTGAAGTCCTGCCTTCAATGTGGCCGGAAGATATCGGAACAGACGCAGGAAAGCAGTTCAATATAGAGAAGCCTGGCAGAGATCAAGACATGTTGGAAGATGTTACAATCATGGAGGAACCAACCATAGCTGATTTCCAGCGATTAATGGAGCTAACTAACTATACAGATAGAGGTTCTTCACAATTAGCCTACTTAATGAAACATTGGGAGTATAAGCAGGCCAACGCCGTTCGCCTTCTTAGAGAAGAACTCGACAACTTGAGCAGGCAAAGGCAGGAAGTTGAGCAAAGGAGGCTGGAGATATTGCAAGAGAATCGGTTTGAGGAAGACTATGGAGATGATAAGAGGCCAGTTTCTATATTGGATGAAGTTTATTACACTTGGCAGGATCTGCCAAGCCGGAAAAGTGATGTTGTTGTGCAGAACAAGAGGATTGAGATTGATGCAGAGTATGATACTGTTGTATACTGGAAGCAGCGCGCGCTGCAGCTGGAAAAACAGTTGGAGGCGAGTATGCAGCGCGAGCAGACGCTTATGGATAAGTTGCAAGAAAGCATTAAGACTATTGAGAGGCAGTCCTCGCCGGTTGAAGAGTTGTCGCAGATTCTGAAGAGAGCTGATAATTTCTTGCATTTTATACTTCAAAATGCACCTGTTGTCATTGGTCACCAGGACAAAGAGTTGCGCTATCGCTTTATCTATAATCACTATCCAAGATTGCAAGAGGAGGACATCATAGGAAAAACAGATGTCGAAATTTTCACAGGTTCCGGTGTGAAAGAATCTCAAGATTTTAAAAGAGAAGTTATGGAGAAAGGATTACCTGCAAAAAAGGAAATCACATTCGAGACAGATCTATTCGGGTCAAAGACATTCTTGATATATGTAGAACCTGTGTTTAGCAAGGCAGGTGAAACAATAGGAATAAATTACATGGGAATGGAAATAACAGATCAGGTGAGAAAAAGAGAAAGGATGGCGAAGCTTCGTGAAGAGATTGCGGTTCAGAAAGCAAAGGAGACTGAACTGAATAAAACCATTCATATTACAGAGGAGACTATGAGAGCAAAACAAATGCTGGCAACAATGTCTCATGAGATAAGATCACCGTTGTCCGGGGTTGTGAGCATGGCTGAGATTCTTTCTACGACAAAACTTGATCGCGAGCAAAGACAACTCTTGGATGTCATGATATCTTCAGGAGATTTGGTTCTTCAACTCATAAATGACATTCTTGATCTTTCCAAGGTTGAGTCAGGAGCTATGAAATTGGAAGCCACGAAATTCCGGCCGAGAGAGGTAGTAAAGCATGTACTTCAAACAGCAGCAGCATCATTGCAGAAAATGCTAACCTTAGAAGGGAATGTGGCAGATGACATACCTATTGAGGTCATTGGAGATGTGTTAAGAATTCGTCAGATTCTCACAAATTTAGTCAGCAATGCTGTGAAGTTTACACATGAAGGCAAAGTTGGAATAAACCTTTATGTTGTGACAGAGCCACCATTTGCCAAAACAGAGGAATGCAATCAAAAGATGAACTCAGAACAATCAACAACTTGTTCAAATGGAGTGAAGGATCATAGATATCCATCAACACTAGCTAAGAGTGGCAGTGATCAAAATCATCATGGCAGTGATCACGCGTTTAACAACGAATTCCGATCTTCAGTTAAGAGTGATTACTCAATGAATGGTGGTGACACTGAGGAGGAAAATCACTCAACTGAAACAACAGTGTGGATTCGTTGCGATGTGTATGACACTGGAATTGGAATACCAGAAAAGGCCATACCTACTTTATTCAAAAGATACATGCAAGTGAGTGCAGATCACGCTCGAAAGTATGGAGGCACAGGACTCGGATTAGCAATCTGCAAACAACTGGTTGAGTTAATGGGAGGTCGTCTAACAGTATCAAGCAAAGAACACGTTGGATCTACCTTCACATTCATACTTCCGTACAAAGTTTCAATAGCTTCTGATGAAAACTCCGACGACACCGACGAACTCTCCGATGTGGACAACAATGACGCCGTTTCCGACGATTTAACAGAAGGCTTCTTCCAATTCCAACCCCGCACTTTAGGATCTCTCTTCTCTTCCAATGGATCCACAAGGCGAACCTCGCACAAGTTCAACGGATTTCCGCCCAATCCTTTCTCATTGCCATCTCCAAACGCCATCGCTTCCAAAGCGATAACGAATTCCGTTGAAGATTCATCTTCCGTTGTTGTTGATGCTTCGGATCTGACAGAATCAACGAGTTCATCGACGACCGAAGAAAAAGATCATCGTGAACATTCAGCCAAATCGCGGCACGAGCCTTCGTCACATAGTAACGGTTGTGATGATTCTTCGAAACAAATGAATGAATCAAGAAAGTCATCGTGTGAGGGTTTAATGAAGAAGGAACATGCCAATTCGCAATGTGTTACTAGCAGCAGTGCATCGCCGACGGAAGAGACTAAAGATTCTTCTAAATTGAAGCCTAAGATTCTTCTTGTTGAAGATAACAAGATCAATGTGATGGTGACACAGTCAATGATGAAGAGGTTAGGGTATAGCATGGATGTTGTTAACAATGGAGTGGAAGCCGTTCGTGCCGTTCAGCGTCACACTTATGACATCATTCTCATGGACGTTTTCATGCCAGTTATGAACGGTCTTCAGACCACGAAACTGATTCGATCTTATGAGGAAACCGGAAACTGGGATGCTGCAAAAAATTCTGGAATTGAACAAATACAACAAATTTCAGATTATGAATGTTGTGTACCACCTAGAAAGCGGATCCACATTATTGCTATGACAGCAAACACAGTAACAGAGAGTGCAGAGGAATGTTATGCAAATGGTATGGACTCATTTGTGTCAAAACCTGTGACTTTCCAAAAATTGAAAGAATGTCTTGAACAGTACCTAAGAGAAGAGATTGACCAAAAGAAGAAGGATGATTTGATGAGATTTAAAGTAATGGATCCTTTAATGAGTGGGCGTGGTGCTGAACCAGTATATCGTGATAAAATAAAAGTACACATTTCCAAGGAAAAATACTCGAAGTCAAAACAAAAAATAGAAGAAAAGCCAAGAGTAGAAAAGGAAATAGAATGGGGCAAGGGCTTGGCTCAGAAGAGGGAAGCTGAGGCTAGGATGAAGGAACTAGAAACCGAGAAGGACAAGCCTTTTGCACGCAGCAGGGACGATCCAGAACTTGACAACATGCTCAAGGATAGATTAAGATGGGGTGATCCTATGGCACATTTGGTAAAGAAAAAATATCCAGAGCCTGTTCTTCCAGATTTGGGAGAAGGTGAGAAGATGAAAGAATCAGGTTTTGTTGTTCCGCAAGATATTTCAGATCACAGCTGGTTGAAAAGAGGTTTAGATGCTGCACCAAATCGCTATGGGATAAGGCCGGGACGACATTGGGATGGAGTTGATCGTAGTAATGGTTTTGAGAAGGAAATGTTCAAGAGAACAAATGAGAGGCAAGTTCGGGATAGAGAAGCTTATCTTTGGTCTGTCTCTGATATGTGA 3591 0.4202 MGCEMELESECIEDMEVEVLPSMWPEDIGTDAGKQFNIEKPGRDQDMLEDVTIMEEPTIADFQRLMELTNYTDRGSSQLAYLMKHWEYKQANAVRLLREELDNLSRQRQEVEQRRLEILQENRFEEDYGDDKRPVSILDEVYYTWQDLPSRKSDVVVQNKRIEIDAEYDTVVYWKQRALQLEKQLEASMQREQTLMDKLQESIKTIERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHYPRLQEEDIIGKTDVEIFTGSGVKESQDFKREVMEKGLPAKKEITFETDLFGSKTFLIYVEPVFSKAGETIGINYMGMEITDQVRKRERMAKLREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSTTKLDREQRQLLDVMISSGDLVLQLINDILDLSKVESGAMKLEATKFRPREVVKHVLQTAAASLQKMLTLEGNVADDIPIEVIGDVLRIRQILTNLVSNAVKFTHEGKVGINLYVVTEPPFAKTEECNQKMNSEQSTTCSNGVKDHRYPSTLAKSGSDQNHHGSDHAFNNEFRSSVKSDYSMNGGDTEEENHSTETTVWIRCDVYDTGIGIPEKAIPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGRLTVSSKEHVGSTFTFILPYKVSIASDENSDDTDELSDVDNNDAVSDDLTEGFFQFQPRTLGSLFSSNGSTRRTSHKFNGFPPNPFSLPSPNAIASKAITNSVEDSSSVVVDASDLTESTSSSTTEEKDHREHSAKSRHEPSSHSNGCDDSSKQMNESRKSSCEGLMKKEHANSQCVTSSSASPTEETKDSSKLKPKILLVEDNKINVMVTQSMMKRLGYSMDVVNNGVEAVRAVQRHTYDIILMDVFMPVMNGLQTTKLIRSYEETGNWDAAKNSGIEQIQQISDYECCVPPRKRIHIIAMTANTVTESAEECYANGMDSFVSKPVTFQKLKECLEQYLREEIDQKKKDDLMRFKVMDPLMSGRGAEPVYRDKIKVHISKEKYSKSKQKIEEKPRVEKEIEWGKGLAQKREAEARMKELETEKDKPFARSRDDPELDNMLKDRLRWGDPMAHLVKKKYPEPVLPDLGEGEKMKESGFVVPQDISDHSWLKRGLDAAPNRYGIRPGRHWDGVDRSNGFEKEMFKRTNERQVRDREAYLWSVSDM 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02950 1196 Pfam His Kinase A (phospho-acceptor) domain 374 437 IPR003661 GO:0000155|GO:0007165
Adu06g02950 1196 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 426 672 IPR036890 -
Adu06g02950 1196 Coils Coil 343 363 - -
Adu06g02950 1196 MobiDBLite consensus disorder prediction 754 845 - -
Adu06g02950 1196 Pfam Pre-mRNA-splicing factor of RES complex 1021 1179 IPR018609 -
Adu06g02950 1196 Coils Coil 182 209 - -
Adu06g02950 1196 CDD HATPase_EvgS-ArcB-TorS-like 488 671 - -
Adu06g02950 1196 SMART HisKA_10 372 437 IPR003661 GO:0000155|GO:0007165
Adu06g02950 1196 MobiDBLite consensus disorder prediction 824 839 - -
Adu06g02950 1196 MobiDBLite consensus disorder prediction 717 733 - -
Adu06g02950 1196 MobiDBLite consensus disorder prediction 717 738 - -
Adu06g02950 1196 ProSiteProfiles Histidine kinase domain profile. 379 674 IPR005467 -
Adu06g02950 1196 CDD REC_hyHK_CKI1_RcsC-like 850 988 - -
Adu06g02950 1196 Pfam Response regulator receiver domain 850 918 IPR001789 GO:0000160
Adu06g02950 1196 MobiDBLite consensus disorder prediction 774 798 - -
Adu06g02950 1196 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 8 993 - -
Adu06g02950 1196 MobiDBLite consensus disorder prediction 526 544 - -
Adu06g02950 1196 Gene3D - 360 437 - -
Adu06g02950 1196 SMART REC_2 848 988 IPR001789 GO:0000160
Adu06g02950 1196 ProSiteProfiles Response regulatory domain profile. 849 992 IPR001789 GO:0000160
Adu06g02950 1196 MobiDBLite consensus disorder prediction 526 569 - -
Adu06g02950 1196 MobiDBLite consensus disorder prediction 805 819 - -
Adu06g02950 1196 Gene3D - 438 678 IPR036890 -
Adu06g02950 1196 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 672 IPR003594 -
Adu06g02950 1196 PRINTS Bacterial sensor protein C-terminal signature 599 613 IPR004358 GO:0016310|GO:0016772
Adu06g02950 1196 PRINTS Bacterial sensor protein C-terminal signature 658 671 IPR004358 GO:0016310|GO:0016772
Adu06g02950 1196 PRINTS Bacterial sensor protein C-terminal signature 634 652 IPR004358 GO:0016310|GO:0016772
Adu06g02950 1196 SUPERFAMILY CheY-like 848 994 IPR011006 -
Adu06g02950 1196 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 8 993 - -
Adu06g02950 1196 Coils Coil 94 121 - -
Adu06g02950 1196 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 371 437 IPR036097 GO:0000155|GO:0007165
Adu06g02950 1196 Gene3D - 841 993 - -
Adu06g02950 1196 Gene3D PAS domain 214 349 - -
Adu06g02950 1196 SMART HKATPase_4 483 674 IPR003594 -
Adu06g02950 1196 MobiDBLite consensus disorder prediction 754 773 - -
Adu06g02950 1196 CDD HisKA 371 433 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02950 Adu-Chr6 107135373 107145444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02950 1 992 Histidine Kinase Gene Family AT5G10720 59.639 0.0 1121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu06g02950 HATPase_c 1.3e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02950 - - gmx:100801640 1482.23