Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02913 ATGGGAACAAATCTGAGTTTTCCCAAAACTGAAAAGTTTTCTGAAGACGGAGAAAATGACTGTCTTAGATATGGTTTGTCATCGATGCAAGGGTGGCGCGCAACAATGGAAGATGCACATGCTGCACATCTTGATGTGGATGCGTCCACTTCATTTTTCGGTGTATATGATGGGCATGGAGGTAAGGCGGTTGCGAAGTTCTGTGCCAAGTATCTTCACCTTCAGGTGCTTAAGAGTAAAGCATACCTTGATGGAGATATAGCAGCTTCTCTTCAGAAAGCTTTTTTCAGAATGGACGAGATGATGCAGGGTCAAAGAGGTTGGAGGGAATTATCAGCCTTGGGTGATAAGATGAACAAGTTTAATGGGATGATGGAAGGTTTGATTCGGTCTCCACGCGGCAACAATGGTAATTGCCAAAGTGATGATTGGACTTTTGAGGAGGGACCCCATTCCAATTTTGCTGGACCAACTTCTGGAAGCACTGCTTGTGTAGCAATTGTTAAAAACAACCAACTTTTTATTGCAAATGCCGGTGATTCGCGTTGTGTTTTGTCTAGGAAGGGTCAGGCATACAATTTAACAAGAGACCACAAACCTGACCTTGCGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTCATCCACGCAGGACGAGTTAATGGGAGTTTAAATCTTGCAAGAGCTATAGGTGACGTGGAATTTAAGCAGAATAAATTTCTCTCAGTTGAAACACAGATTGTGACTGCAAATCCAGATATAAACATTGTTGATCTTTGCGACGAAGATGAATTTATGGTGCTCGCTTGTGATGGCATATGGGACTGCATGTCGAGTCAACAATTGGTTGATTTCGTGCGTCAAGAACTGCTGTTGGAAACAAAACTTTCTGCGGTGTGTGAGCGAGTACTAGATCGTTGTTTGGCACCGTCAATTACTATTGGCGAGGGATGCGATAACATGACCATGATCTTGGTGCAGTTCAGAAAACCTTCCCAATTCATGCCCCAACAGAAGAGCAATACTCTTCAAATGAAGCAAAACTAG 1050 0.4295 MGTNLSFPKTEKFSEDGENDCLRYGLSSMQGWRATMEDAHAAHLDVDASTSFFGVYDGHGGKAVAKFCAKYLHLQVLKSKAYLDGDIAASLQKAFFRMDEMMQGQRGWRELSALGDKMNKFNGMMEGLIRSPRGNNGNCQSDDWTFEEGPHSNFAGPTSGSTACVAIVKNNQLFIANAGDSRCVLSRKGQAYNLTRDHKPDLAIEKERILKAGGFIHAGRVNGSLNLARAIGDVEFKQNKFLSVETQIVTANPDINIVDLCDEDEFMVLACDGIWDCMSSQQLVDFVRQELLLETKLSAVCERVLDRCLAPSITIGEGCDNMTMILVQFRKPSQFMPQQKSNTLQMKQN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02913 349 SMART PP2C_SIG_2 28 329 IPR001932 -
Adu06g02913 349 Pfam Protein phosphatase 2C 142 311 IPR001932 -
Adu06g02913 349 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Adu06g02913 349 Gene3D - 1 330 IPR036457 -
Adu06g02913 349 CDD PP2Cc 23 329 IPR001932 -
Adu06g02913 349 SMART PP2C_4 12 327 IPR001932 -
Adu06g02913 349 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Adu06g02913 349 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 338 - -
Adu06g02913 349 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Adu06g02913 349 SUPERFAMILY PP2C-like 4 331 IPR036457 -
Adu06g02913 349 PANTHER PROTEIN PHOSPHATASE 2C 1 338 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02913 Adu-Chr6 106833283 106838042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02913 1 333 PP2C-type Phosphatase Gene Family AT2G25070 74.474 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02913 K17499 - gmx:100787778 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02913 06 106833283 106838042 Adu06g02913 06 106833283 106838042 ECH
Adu06g02913 06 106833283 106838042 Adu10g01876 10 85844183 85848867 PCT