Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02896 ATGGATTCAACATGCGTTGATACTTCACTCAACCTCAATCTTTCTCCTTCTCCAACTCATATGAACCCTACTGTGGCAGAAGTAGTTTTGGTTGAAGAGTTACATCGTTTGAGTAGTGAGAACAAGAGGCTTACGGAAACGTTGACTCACATGTGCGTTAGCTATGAAGCTTTGCAGAAGCATTTGACCAAATTGATGAACACATCATCTGATTGTTATAATCATCATCAATCGCGGAAGAGAAAAGCTGAAAGCTATGAAAATTGTAACGATGAGGAGGAGTCATTATTCATCAAAAGGCCTAATAACATTGTTCATCATCATAATAATAATAATAATAAGGTTTCCAAGGTTCTTGTGAAGACAGATGCATCTGATTCTAGCTTGTATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTGACTAGAGACAACCCTTCTCCAAGAGCGTACTTTCGTTGCTCCTTCGCCCCAAGTTGCCCAGTGAAAAAGAAGGTGCAAAGAAGTGTTGAAGACCCAACAATACTTGTAGCAACATATGAAGGAGAGCACAACCATGGTCGTAGCCAAACTGAAATTTCACTTGTCTCATCCCAAAGCCATTCAAGTGAAACAATAATCCCTTTAGTTTCTTCACCATCATCACGCATTATGTCATCTCCAACTACTCTTGACTTGGTCAAAAATTCAATAAGTTGCGTTGACATTGATCACAATGCTCAAAACAAGTCTTCTTCTTCTTCTTATATCCATAAGTTTTTGGTTCAAGAAATGGCCACTTCCTTGACAAGTGATCCTAACTTCACGGCAGTACTTGCCACTGCAATTTCAGGAAAAATTCTAGAACAGACGTCTCTGGAAAAATTGTGA 879 0.3902 MDSTCVDTSLNLNLSPSPTHMNPTVAEVVLVEELHRLSSENKRLTETLTHMCVSYEALQKHLTKLMNTSSDCYNHHQSRKRKAESYENCNDEEESLFIKRPNNIVHHHNNNNNKVSKVLVKTDASDSSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSVEDPTILVATYEGEHNHGRSQTEISLVSSQSHSSETIIPLVSSPSSRIMSSPTTLDLVKNSISCVDIDHNAQNKSSSSSYIHKFLVQEMATSLTSDPNFTAVLATAISGKILEQTSLEKL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02896 292 Gene3D WRKY domain 114 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g02896 292 SMART WRKY_cls 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g02896 292 ProSiteProfiles WRKY domain profile. 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g02896 292 SUPERFAMILY WRKY DNA-binding domain 130 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g02896 292 Pfam WRKY DNA -binding domain 133 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g02896 292 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 286 - -
Adu06g02896 292 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 286 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02896 Adu-Chr6 106620261 106622346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02896 3 291 WRKY Transcription Factor Family AT1G80840 42.357 2.33e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu06g02896 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02896 - - gmx:100810978 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02896 06 106620261 106622346 Adu10g01862 10 85358956 85361527 PCT