Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02886 ATGGCAAACTGTCACCGGAACAACGTCGGATCCCTCGTTCTCGGCCACCACCCTACAAAGTCCTCCGCCGCTACCGTTAGCGGCAACGTCCGCCTGTGGAACTCCCTCTCCGCCGCCTCCTTCCGCCGCATTATCTTCGACGCCCTCAGCTGCGGTGGCGCCGCTTACCGCCGGAATAATCACACCGACTCAGCCTCCTCCACCGACGGATCCGATTCCGACTCCGAATGCCCGAAACCTAACCCTAACCCGAAGCGCAATGTGAGGTCCGAGAAGCTCTCGGATCTCCTGAGCATGGCGGATTCGGAGGTGGACGCGGAAACCGAGACGAAGAAGAAGGAGGAGGCTCTTGACGACCTGAAGCGCCTCGTGTCGGAGCTTCAGGCGGAGGATTCGCCTCCGGTAAAGCGAGTAGCCGCAGCTTCCGCCGTGAGGAGGCTGGCGAGGGAGGACGCTGAGGTTAGAGTGACGTTCGCAATGCTCGGAGCGATTCCGCCGCTTGCAGCCATGCTCGATTTAGAAGACCTCGATTCTCAGGTAGCTTCGCTCTACGCGTTGCTTAACCTTGGAATCGGAAACGATGCAAATAAAGCTGCTATTGTGAAAGTTGGGTCTGTACACAAGATGTTGAAGCTAATTGAATCTCCAGATTCTGTGGAAACATCAGTTTCAGAAGCAATAGTTGCAAACTTTCTCGGATTGAGTGCTTTGGATTCGAACAAACCAATAATTGGATCCTCTGCAGCAGTACCATTCCTAGTTAGAACCCTCCAGAATTTAGATAATAAAACAAGCTCCCAAGCCAAACAAGATGCTCTCAGAGCAATGTACAATCTTTCAATCTTCCCAGGCAATGTTTCATTCATTTTGGAAACCAACTTGGTCCCATTTCTGATAAACTCCGTAGGAGATATGGAAGTAACCAACCGAGCCCTCGCAATCCTAAGCAACTTGGTGTCAACAAGAGAGGGTAGGAAGGCCACTAGTGCCGTCCCGGATGCTTTCCCTATCCTTGTGGATGTGTTGAATTGGACTGACTCACCGGAATGCCAAGAAAAGGCATCTTATGTTTTGATGATAATGGCACACAAATCTTATGGCGATAGGCAGGCCATGATTGAGGCTGGGATTGCGTCGTCACTCCTTGAGTTGTCCCTTCTTGGCACCACATTGGCACAGAAAAGGGCCTCAAGGATATTGGAATGTTTGAGGGTAGACAAAGGGAAGCAGGTTTCAGGGAGCTTTGGAGGGAATTTAGGCGCAACGGTATCCGCCCCAATCTGCGGATCGTCATCGTCTTGTGCAAAGATGGATGGAGGGGGAAAGGATGGTTCGGACGAGGAGGAGGAGATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAGTTAGTCCAGCAGAGTCTGCAAAACAATATGAGGAAGATTGCTAAAAGGGCCAATTTGCCTCAAGATACTGTTCCTTCAGATCATTTTAAATCACTCACTGCAAGTTCAACTTCGAAGAGCCTGCCATTTTGA 1515 0.5089 MANCHRNNVGSLVLGHHPTKSSAATVSGNVRLWNSLSAASFRRIIFDALSCGGAAYRRNNHTDSASSTDGSDSDSECPKPNPNPKRNVRSEKLSDLLSMADSEVDAETETKKKEEALDDLKRLVSELQAEDSPPVKRVAAASAVRRLAREDAEVRVTFAMLGAIPPLAAMLDLEDLDSQVASLYALLNLGIGNDANKAAIVKVGSVHKMLKLIESPDSVETSVSEAIVANFLGLSALDSNKPIIGSSAAVPFLVRTLQNLDNKTSSQAKQDALRAMYNLSIFPGNVSFILETNLVPFLINSVGDMEVTNRALAILSNLVSTREGRKATSAVPDAFPILVDVLNWTDSPECQEKASYVLMIMAHKSYGDRQAMIEAGIASSLLELSLLGTTLAQKRASRILECLRVDKGKQVSGSFGGNLGATVSAPICGSSSSCAKMDGGGKDGSDEEEEMMSEEKKAVKQLVQQSLQNNMRKIAKRANLPQDTVPSDHFKSLTASSTSKSLPF 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02886 504 MobiDBLite consensus disorder prediction 478 504 - -
Adu06g02886 504 MobiDBLite consensus disorder prediction 61 80 - -
Adu06g02886 504 Gene3D - 260 413 IPR011989 -
Adu06g02886 504 MobiDBLite consensus disorder prediction 61 88 - -
Adu06g02886 504 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 504 - -
Adu06g02886 504 SUPERFAMILY ARM repeat 119 403 IPR016024 -
Adu06g02886 504 Coils Coil 445 465 - -
Adu06g02886 504 MobiDBLite consensus disorder prediction 485 504 - -
Adu06g02886 504 Coils Coil 103 130 - -
Adu06g02886 504 MobiDBLite consensus disorder prediction 435 458 - -
Adu06g02886 504 Gene3D - 112 259 IPR011989 -
Adu06g02886 504 MobiDBLite consensus disorder prediction 1 22 - -
Adu06g02886 504 SMART arm_5 324 363 IPR000225 GO:0005515
Adu06g02886 504 SMART arm_5 151 191 IPR000225 GO:0005515
Adu06g02886 504 SMART arm_5 282 320 IPR000225 GO:0005515
Adu06g02886 504 SMART arm_5 193 236 IPR000225 GO:0005515
Adu06g02886 504 SMART arm_5 237 281 IPR000225 GO:0005515
Adu06g02886 504 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02886 Adu-Chr6 106466445 106469295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02886 136 410 U-box Gene Family AT1G67530 30.142 3.25e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02886 - - mtr:MTR_1g014420 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02886 06 106466445 106469295 Adu10g01852 10 84763554 84765617 PCT