Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02870 ATGAACAATGGCGTTAGTCAAGATAGTATACATAACAGGCAACAAATTTATGGACTTAACCGTTACACAGAGAGACCTTCAAAATCTTTCTTGATGTTTATTTGGGAGGCATTGCATGACTTATCACTAATCATTCTCATGGTATGTGCTCTAGTTTTTATAGGTATAGGGCTTCCTACCGAAGGATGGTCAAAGGGTGTTTATGATGGTCTTGGTATCATATTTAGTGTGTTTTTGGTTGTTACTATTACTGATATTAGTGACTACCAGCAATCCTTGCAGTTTAGAGATTTGGACAAAGAGAAGAAAAAGCTCTTTGTCCAGGTGACCAGTGATGGAAAAAGATAG 348 0.3707 MNNGVSQDSIHNRQQIYGLNRYTERPSKSFLMFIWEALHDLSLIILMVCALVFIGIGLPTEGWSKGVYDGLGIIFSVFLVVTITDISDYQQSLQFRDLDKEKKKLFVQVTSDGKR 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02870 115 Pfam Cation transporter/ATPase, N-terminus 3 52 IPR004014 -
Adu06g02870 115 Gene3D - 36 91 - -
Adu06g02870 115 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 101 IPR023298 -
Adu06g02870 115 SMART Cation_ATPase_N_a_2 3 58 IPR004014 -
Adu06g02870 115 PANTHER CALCIUM-TRANSPORTING ATPASE 2 115 - -
Adu06g02870 115 Gene3D - 3 35 - -
Adu06g02870 115 PANTHER CATION TRANSPORTING ATPASE 2 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02870 Adu-Chr6 106168803 106169150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02870 1 115 Primary Pumps ATPases AT2G41560 61.739 4.56e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02870 K01537 - gmx:100785768 190.274