Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02810 ATGGGAGAAACCAAGGACGAAGGATACGAGGAGGAGCTTCTTGACTACGAAGAGGAGGACGAGAAGGCACCTGACTCCGTTGGAACCAAAGTCAACGGTGAAGCTGCCAAGAAGGGCTATGTTGGTATCCACAGTTCAGGATTCAGAGACTTCCTTCTGAAGCCAGAGCTTCTCCGGGCTATTGTGGACTCTGGATTTGAGCATCCTTCCGAAGGCAAGTTATCACTCATCCTCATTTATATGCAACACGAATGCATACCTCAGGCAATCCTTGGAATGGATGTGATTTGTCAAGCTAAATCTGGAATGGGAAAAACTGCAGTGTTTGTTCTTTCAACTTTGCAGCAGATTGACCCTGTTGCAGGACAAGTTTCTGCACTTGTTCTGTGCCACACTAGGGAATTGGCATACCAGATATGCCATGAGTTTCAGAGGTTCAGCACTTACTTACCTGATCTCAAGGTTGCTGTCTTCTATGGAGGTGTCAACATTAAAGTTCATAAGGATCTACTGAAGAATGAATGCCCTCATATTGTTGTTGGTACACCTGGAAGAATACTAGCACTAGCTAGGGACAAGGACCTTTCATTGAAGAATGTTAGGCATTTCATTTTAGATGAATGTGATAAGATGCTGGAATCACTGGACATGAGAAAAGATGTGCAAGACATTTTCAAGATGACTCCCCATGATAAGCAAGTGATGATGTTTTCTGCAACACTTAGCAAGGAAATTCGTCCCGTCTGCAAGAAATTTATGCAAGATCCAATGGAAATTTATGTTGACGATGAAGCCAAGTTGACCCTTCATGGACTTGTGCAGCACTATATTAAATTGAAAGAGGAGGAAAAGAACAGGAAGCTGAATGACCTTCTTGATGCATTGGACTTTAATCAAGTTGTGATATTTGTTAAAAGTGTTAGCAGAGCAGCTGAGCTTGACAAACTACTTGTGGAGTGCAACTTCCCATCAATATGTATTCATTCTGGAATGTCCCAGGAAGAAAGGTTAAAGCGATACAAAGGTTTTAAGGAGGGCCACACTAGGATTCTTGTGGCTACAGATTTGGTCGGTAGGGGAATTGACATCGAACGTGTGAACATAGTTATAAACTATGACATGCCCGATTCTGCAGACACTTACTTGCACAGAGTAGGTCGAGCTGGAAGGTTTGGCACGAAGGGCCTAGCAATTACATTTGTTTCATGTGCTAATGACGTTGATGTCCTCAACAATGTTCAGTCCAGGTTTGAGGTTGATATTAAGCAACTTCCTGAGCAGATTGATACCTCTACCTACAGTGTTCTAGTAATGGCGTCTCATCCGTCATACACAGACATTTCAATTCTCAATCACCAAATCGTTGTACAAAATGATACAATGGAGGATAAGGTTCAACAATGGACAGGCACCAGGAACAGAGATAGATGGGCCCCAAACGGACAAGAAACACCGCTCCTCAATGTATAG 1470 0.4293 MGETKDEGYEEELLDYEEEDEKAPDSVGTKVNGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKLSLILIYMQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFQRFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCANDVDVLNNVQSRFEVDIKQLPEQIDTSTYSVLVMASHPSYTDISILNHQIVVQNDTMEDKVQQWTGTRNRDRWAPNGQETPLLNV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02810 489 SMART ultradead3 74 275 IPR014001 -
Adu06g02810 489 MobiDBLite consensus disorder prediction 469 489 - -
Adu06g02810 489 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 56-LIKE 28 431 - -
Adu06g02810 489 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 28 431 - -
Adu06g02810 489 Gene3D - 42 267 IPR027417 -
Adu06g02810 489 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 271 432 IPR001650 -
Adu06g02810 489 Pfam Helicase conserved C-terminal domain 285 392 IPR001650 -
Adu06g02810 489 SMART helicmild6 311 392 IPR001650 -
Adu06g02810 489 Gene3D - 268 436 IPR027417 -
Adu06g02810 489 CDD DEADc_DDX39 45 261 - -
Adu06g02810 489 Pfam DEAD/DEAH box helicase 81 245 IPR011545 GO:0003676|GO:0005524
Adu06g02810 489 CDD SF2_C_DEAD 272 401 - -
Adu06g02810 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 405 IPR027417 -
Adu06g02810 489 MobiDBLite consensus disorder prediction 1 22 - -
Adu06g02810 489 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 86 259 IPR014001 -
Adu06g02810 489 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02810 Adu-Chr6 105314968 105321467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02810 1 433 Eukaryotic Initiation Factors Gene Family AT5G11200 81.895 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02810 K12812 - gmx:100796232 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02810 06 105314968 105321467 Adu06g02810 06 105314968 105321467 ECH