LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu06g02801	ATGATCATGGAATCTCCAGAACCTTCGAAGAACAATGCAACTTCTTCGGCCTCCACAATCAATGCCGTCGCCATCAATGACTCCCCTCAAGTTCAAGAATCACCCTTTTTCAGGTTTGTAAACAACTTATCTCCTATAAAGCAACCTGCCAAGGCTTCTCATGTGGCACAAGGCTTCGTCGGACTCAATTCTCCGCCTCTTGTATTCACATCACCGCGTATTAGTTGTCACCGTGAAACACACTTATTGGAAAGACCTTCAGGTGCTCAGTCATCAAGTCGATCAGAATCTCAAAGTGACAATAGAGGCAAGTTAATTGAAGCTCCTGGTGATTCTGCGAAATCAACTGCTGAACTGCCACTTGCAGGGGAGTTTATAACTGAAACTGTGAAGGATTTTGATGTCAAAAATGATGCAACCACCCAACACTGCAGTCCGCCGCCATCTGTTGATAAATATCTGGTTGATCCTGTGGATATTGATCAAATGTACTCTGTCAACCCAGATGAGAAACAATCTAATGATACTGAATCATCTCTGAGTAACTTAGCTCAATCAAAGAAAAGCATATCAGAAGTTGACAGCAAAGATGATCCTTGTGATAAAGCAGATAAACCTTTGATTTTGTTAGAGAAAGTTGATAAGGCTCAAACAGGGCCAGCATATGTTGAAGGGCATGATCAAGTAACAGAGGAGAAAAATGATGTTTTAATGGCTTTGCACAAGCGCATGAAGGATGATAATGACTGTACATCTCAGTTGCTTCCCGAACAGACTCTGCAGGATGTTAAAGATTGGGAAGATTGTGATGAGATGGTGTCAACCTCACATGTAGGTGCTGAGAACGTGTCACAAGATGCTTCTGAGGTTACGCTAAAGCATCATGGCCTTCGTAGACGGTGTCTACAATTTGAGGAGGCTGCATCTAATGCTCGTGGAAGTGATAAATCTTGTATGAAATCAAATGCAGCTCCAATCAAAATAAAAATGGTCAAGCTGTCTGAACCTGGCACTTCTTCCTTGTTTCCTCAAAGATGTAGTGGAAACTCAACTGTGACATGTCCCAAGCCATCAGGCATTGGATTGCATTTAAATAGCATTGTAAATGCTATGCCTCCTGGTTGTGCTGCAACTACAGGTATTAGATCATCAGATTGTTTACAAGGGAAGAAATCTGCATTGATTAGTATAAATAAAGTGGAGAACATGAAGGGACGCCTAACTTCATCAAATATAGATGGGCAATCATTAATTGATAGTGGAAATGAGAGCCAAGCCAACATTTCCTCACTACCTGTAGATTCTTTCATTTCTGGGTCTCATAGCCCTACAGAACCTGTTGCTATATGTCCTGAAAGTCTCCATGATAAGAGGAAACTAAGCCCTACAGGTGACGGATATCCTGAGGAATCAAAGCAACCTAGCCCGAGCAAGAAAAAGAAGAGAGCATCAAGCAACAATGATGATAATGGCTGTAAAAGGTGCAACTGTAAAAAGAGTAAATGTTTGAAACTTTATTGTGATTGTTTTGCTGCTGGAATCTATTGCGCTGATGATTGTTCTTGCCAAAGCTGCTTGAATAGACCAGAGTATGAAAATAAAGTTATTGAAACAAGGAAACAAATTGAATCCCGTAATCCTCTTGCATTTCTTCCCAAGATTGTCCCTCAATCCACTGATCGTCCATCAAATAATATGGAGGATGCAATTCTGATGACACCTTCATCAGCCAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAATGTGTCAGAAAAAATATTGTGAATGTTATCAGGCTGGTGTCGGATGCTCTAGCGGATGCCGATGTGAGGGATGTAAGAATGTTTATGGCACAAAAGAAGATTATGTTGCAAGGGATCATGTTTTCAATAAAGAAAGGATGGGTAGCAGGATTGAAAATGAACCAGATGGTGCTTTTCTCAACAAACTGGAAATGGTGGCAAGCAAGTCAGATTTGTTCCATGTCTCACCTATAACGCCATCATTGCAATGCTCTGACCAAGGAAAGGAGGCTGCAAAATTCGGACTTCATTCTGGACAGCATCTACCCTCCTCTGAAACTAATGTTGATATGCTTCCCTCAAGTGCAAATTATAACAAGTCTCTGGAGAACTCGCAGAATGTTCTTGCAAACCTGGAAACAGATGAGATGTTGGAAACTGCTTCCTATGATTGGCAAGTGGATTGCAGCGATGTAATGGATCAATCATCACCATGTGATTTGGTTGCTAACATACTTCAGGATACTCCCTTGTCAAATCCTGAATCAATGTCAAGTGCTTCACTGTTCACATCTAGTACAAAGGAGTGCGGAAACATTCCTCTATCCCAATCACAAGGACGCATTCGCCTAATATCCGGGAGCTCTCTTCGTTGGCGTGGTTCACCAAATACCCCAAGGGCTAGATTAGGTGTAAAACACCTTCAGTCTCTTGATTCTGAAAGCAGACTCTTCGACATAATGGAAGATGAAACACCAGATGTATTGAAGGAAGGTTTAACACCCACCAAGTCTGTGAAAGCAAATTCCCCAAACCAGAAGCGAGTTTCTCCTCCCCATAGTCGTCTACGCGGACTTGGTTCAAGCTCCTCTGGAGGCTTCAGAACTGGCAGGAAATTTATACTGAAATCTGTTCCTTCCTTTCCCCCATTGACACCTTGTGTTGAATCCAGAGATAATAGCAGTGAAGATTTAGGTAACAATGCCAAGTAA	2736	0.4185	MIMESPEPSKNNATSSASTINAVAINDSPQVQESPFFRFVNNLSPIKQPAKASHVAQGFVGLNSPPLVFTSPRISCHRETHLLERPSGAQSSSRSESQSDNRGKLIEAPGDSAKSTAELPLAGEFITETVKDFDVKNDATTQHCSPPPSVDKYLVDPVDIDQMYSVNPDEKQSNDTESSLSNLAQSKKSISEVDSKDDPCDKADKPLILLEKVDKAQTGPAYVEGHDQVTEEKNDVLMALHKRMKDDNDCTSQLLPEQTLQDVKDWEDCDEMVSTSHVGAENVSQDASEVTLKHHGLRRRCLQFEEAASNARGSDKSCMKSNAAPIKIKMVKLSEPGTSSLFPQRCSGNSTVTCPKPSGIGLHLNSIVNAMPPGCAATTGIRSSDCLQGKKSALISINKVENMKGRLTSSNIDGQSLIDSGNESQANISSLPVDSFISGSHSPTEPVAICPESLHDKRKLSPTGDGYPEESKQPSPSKKKKRASSNNDDNGCKRCNCKKSKCLKLYCDCFAAGIYCADDCSCQSCLNRPEYENKVIETRKQIESRNPLAFLPKIVPQSTDRPSNNMEDAILMTPSSARHKRGCNCKRSMCQKKYCECYQAGVGCSSGCRCEGCKNVYGTKEDYVARDHVFNKERMGSRIENEPDGAFLNKLEMVASKSDLFHVSPITPSLQCSDQGKEAAKFGLHSGQHLPSSETNVDMLPSSANYNKSLENSQNVLANLETDEMLETASYDWQVDCSDVMDQSSPCDLVANILQDTPLSNPESMSSASLFTSSTKECGNIPLSQSQGRIRLISGSSLRWRGSPNTPRARLGVKHLQSLDSESRLFDIMEDETPDVLKEGLTPTKSVKANSPNQKRVSPPHSRLRGLGSSSSGGFRTGRKFILKSVPSFPPLTPCVESRDNSSEDLGNNAK	911

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu06g02801	911	MobiDBLite	consensus disorder prediction	451	490	-	-
	Adu06g02801	911	MobiDBLite	consensus disorder prediction	451	465	-	-
	Adu06g02801	911	MobiDBLite	consensus disorder prediction	85	99	-	-
	Adu06g02801	911	MobiDBLite	consensus disorder prediction	840	911	-	-
	Adu06g02801	911	MobiDBLite	consensus disorder prediction	895	911	-	-
	Adu06g02801	911	MobiDBLite	consensus disorder prediction	472	490	-	-
	Adu06g02801	911	MobiDBLite	consensus disorder prediction	166	189	-	-
	Adu06g02801	911	Pfam	Tesmin/TSO1-like CXC domain, cysteine-rich domain	581	615	IPR005172	-
	Adu06g02801	911	Pfam	Tesmin/TSO1-like CXC domain, cysteine-rich domain	493	528	IPR005172	-
	Adu06g02801	911	Coils	Coil	703	723	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu06g02801	Adu-Chr6	105230681	105236540	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu06g02801	831	894	CPP Transcription Factor Family	AT4G14770	50.000	5.99e-08	54.7

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	CPP	Adu06g02801		TCR	8.4e-11	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu06g02801	K21776		-	gmx:547664	852.432

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu06g02801	06	105230681	105236540	Adu06g02801	06	105230681	105236540	ECH
	Adu06g02801	06	105230681	105236540	Adu10g01679	10	76792346	76794814	PCT

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