Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02800 ATGCCTAGGTTTTTATGCTCCTCACTTTCTTCTTCTCATCTCATCACTTTCGATACCCATTTTCCCCTTTCTATGTGGTTCTGCGTTTCTCAGATTGGTGATGGAGATCCAGTTGAGAGGATGGTTTTCGAGCTCTTCTATGACATTGCTCCAAAGACTGCAGAAAATTTTCGTGCACTGTGTACAGGAGAAAAAGGAGTTAGCCCAAATACTGGGAAATCACTACACTACAAGGGTTCTTTCTTCCATTACATTCTGAAAGGCTCTATTGTGCGGGGTGGCGATTTTGTCAATCGAAACGGGACTGGTGGGGAAAGCATATATGGTTCAAAGTTTCCAGATGAGTCACCTAGGCTGAAGCATGATTCTTCGGGCCTTCTATCAATGGCAATTGCTGATCGCGAAACACTGGGTTCTCATTTTATCATCACTTTAAAAGCGGATCACCATCTTGATAGAAAGCATGTAGTCTTTGGCAAGCTTGTCCATGGGCATAATGTGTTGAAGAAAATTGAAGACACAGGTGATGAAGAAGGGCATCCAACTGTGACCGTTAAAATAATTAATTGTGGTGAATTCAATGACGCAGATGGAAAGAAGATAAATAAATCTGAAGCCAATAGTCAAGAAGTGCAGCGTAAGGGAAAGCACAAAAAATCTTCAAGAGACCGAAGAAAAAGGAGAAAATACTCCTCATCAGATTCTGAGAGTTCTGATTCGGACATGGAATCTTCGGAAAGTGATAGTGATTCTGAGTCGGATGGTTCTTCATCATCTTATGTAAGTTCCTCTAGTGATGACAGGCGAAGGAAGAGAAAGAGGTCTTCGAGGAAGGATAAACATAGACGTGGAAAGCGAAGAGATAAACGCCGAGATAAGAGGCGCAGGAAGCGTGACAAGAAGTCAAAACGTAGATCAAAACGGGATTCTGGTAGTCTAACTGATTCGGATAGTGGAACTAAGAGTGGCAATAGCCCTGATAGCAGAAGTCAAGCTGATGGGAAAGATCTGAAGCATAAAGATCATGGGCAGAAAAATGCTGAAGATCAGTCTCCATTAAATGTGGAGAATGAATTGCCTCTTGCACATCGGAAAAAGCGGGAGGAACTGGATATGCCAGAGGAAGAATTTCCGAAGGAGAATGGAGCACGGCGCAGCAATGGCATAGGAACCAACCATCGATCTGACAGAAGTGAAGAAAGGCAACCTGATGTGGTTGATGATCATCCAGGGAAATCTAGGAGTCGAAGCATGAGTCCTAAGCGAGCTGTGAGTAAGAGTATGAGTATTAGTCCCAGGGGTGGAAAAAGAAGCCCAAGCCCAAGTCCAGACAGGAGTTTGAGCAGAAGTCCAAGTCGTAGTAGAAGCCCTCCTGCTCCATCAAGGCGGAGTTTGAGCAGGAGTCCTGCTAGAAGCATAAGCAGAAGTCCTGTTAGAAGGACAAGCAGAAGTCCAGACCGAAGCATCATTAGAAGCCCAGTGAGGGGTAGGAAGGGGAGAAGTGTCAGCAGAAGCCCCATGAGAACTCGCAATCATAGAAGTATCAGTAGAAGCTCTGGGAGAATCCGTGATCGCAGTGTTAGTAGAAGTCCTGTGAGAGCCCGTGATCGCAGAAGTATCAGTAGAAGCCCTGTGAGAGCTCGTGATCGTGGAAGTGTCAGCCGAAGCCCTGTGAGATCCCATTCTCGCAGTCATCGGAGCAGGAGTTCTCCCAGACCACCATCAAGAAGAACAATCAGTAGGAGCCCTGTGCGAGTGTCAAGAAAGAGCATAAGCCGAAGTCCAGTTAGGTCCTCTGCCAGAAGCTTGAGTAGAAGCTCTGGGAGGGTTCCTTTGAGAAGCATTAGTAGAAGCCCTGTCAGAGCCCCAAGTAGAAGTGATCGCCGCAGCTATTCTAGGAGTCGCAGCCCTGTCCGTAGGACAAGGACACCTCGTGGTAGGAGCATTTCGAGAAGCGTCTCACCTGATGCTTCACCAAAGCGTATCAGAAGGGGAAGAGGTTTTAGTGAACGATATTCTTATGCCAGAAGGTATAGAACCCCTTCTCGTTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAGTGACCGTGACAGATACACAAGTTATAGGAGGTATTCCCCCAGGCGATACAGGAGCCCACCACCACGTGCAAGATCTCCTCCAAGATACCGAGGCAGGAGGAGCAGGACACCTTTATCACGCAGCCCTCGTTATCGCAGTCGACGATATAGCAGAAGCCGTAGCCCTGTTCGTAGCCGTTCACCAGTTGAACCATATCGAGCTCGTGTCTCTCCTCGTGCAGAGAGGCGCATGTCCTCATCTCGGAGCAGGAGTCCGTCACGATCGAGGTCTTCTGTAGAATCACAATCTCCACGAAAAGCAAGCGGAGTCAACAGGTCAAGGTCGTCATCCGGAAGCCCAAATGGAAAGAAAGGCCTAGTCTCGTATGAAGATGGTTCTCCTGACTCAAGCCCGAGGTAA 2484 0.4746 MPRFLCSSLSSSHLITFDTHFPLSMWFCVSQIGDGDPVERMVFELFYDIAPKTAENFRALCTGEKGVSPNTGKSLHYKGSFFHYILKGSIVRGGDFVNRNGTGGESIYGSKFPDESPRLKHDSSGLLSMAIADRETLGSHFIITLKADHHLDRKHVVFGKLVHGHNVLKKIEDTGDEEGHPTVTVKIINCGEFNDADGKKINKSEANSQEVQRKGKHKKSSRDRRKRRKYSSSDSESSDSDMESSESDSDSESDGSSSSYVSSSSDDRRRKRKRSSRKDKHRRGKRRDKRRDKRRRKRDKKSKRRSKRDSGSLTDSDSGTKSGNSPDSRSQADGKDLKHKDHGQKNAEDQSPLNVENELPLAHRKKREELDMPEEEFPKENGARRSNGIGTNHRSDRSEERQPDVVDDHPGKSRSRSMSPKRAVSKSMSISPRGGKRSPSPSPDRSLSRSPSRSRSPPAPSRRSLSRSPARSISRSPVRRTSRSPDRSIIRSPVRGRKGRSVSRSPMRTRNHRSISRSSGRIRDRSVSRSPVRARDRRSISRSPVRARDRGSVSRSPVRSHSRSHRSRSSPRPPSRRTISRSPVRVSRKSISRSPVRSSARSLSRSSGRVPLRSISRSPVRAPSRSDRRSYSRSRSPVRRTRTPRGRSISRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRSDRDRYTSYRRYSPRRYRSPPPRARSPPRYRGRRSRTPLSRSPRYRSRRYSRSRSPVRSRSPVEPYRARVSPRAERRMSSSRSRSPSRSRSSVESQSPRKASGVNRSRSSSGSPNGKKGLVSYEDGSPDSSPR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02800 827 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 32 350 - -
Adu06g02800 827 SUPERFAMILY Cyclophilin-like 34 195 IPR029000 -
Adu06g02800 827 MobiDBLite consensus disorder prediction 315 330 - -
Adu06g02800 827 Gene3D - 23 194 IPR029000 -
Adu06g02800 827 MobiDBLite consensus disorder prediction 196 216 - -
Adu06g02800 827 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 39 191 IPR002130 GO:0000413|GO:0003755
Adu06g02800 827 MobiDBLite consensus disorder prediction 418 479 - -
Adu06g02800 827 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 60 IPR002130 GO:0000413|GO:0003755
Adu06g02800 827 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 152 IPR002130 GO:0000413|GO:0003755
Adu06g02800 827 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 140 IPR002130 GO:0000413|GO:0003755
Adu06g02800 827 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 153 168 IPR002130 GO:0000413|GO:0003755
Adu06g02800 827 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 82 94 IPR002130 GO:0000413|GO:0003755
Adu06g02800 827 MobiDBLite consensus disorder prediction 690 705 - -
Adu06g02800 827 MobiDBLite consensus disorder prediction 721 749 - -
Adu06g02800 827 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 34 192 IPR002130 GO:0000413|GO:0003755
Adu06g02800 827 MobiDBLite consensus disorder prediction 497 516 - -
Adu06g02800 827 MobiDBLite consensus disorder prediction 778 811 - -
Adu06g02800 827 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 32 350 - -
Adu06g02800 827 MobiDBLite consensus disorder prediction 331 347 - -
Adu06g02800 827 MobiDBLite consensus disorder prediction 517 556 - -
Adu06g02800 827 MobiDBLite consensus disorder prediction 194 827 - -
Adu06g02800 827 MobiDBLite consensus disorder prediction 270 305 - -
Adu06g02800 827 MobiDBLite consensus disorder prediction 573 613 - -
Adu06g02800 827 MobiDBLite consensus disorder prediction 657 677 - -
Adu06g02800 827 MobiDBLite consensus disorder prediction 359 382 - -
Adu06g02800 827 MobiDBLite consensus disorder prediction 390 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02800 Adu-Chr6 105220302 105228158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02800 43 193 U-box Gene Family AT5G67530 38.562 1.49e-19 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02800 K09566 - gmx:100800303 325.479