LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu06g02796	ATGGGAGTGAAGGGCATGTTATTTGTTATTGTTGCCTTGGTCCTTGTAGAAGTAGAAGTAGAAGTAGTAGCTATAGATGATATTGACAGTACTCAAATAGCTCTTCATGGGTGCCAAAGGAATTGTGGAGATGTTCAAATTCCGTATCCATTTGGCATAGGAAAAACCGAAAACGGTACTACCTGTTTCTTAGACAAACCATTTAATCTTACTTGCAACAGTAGTAGTTCCAGTTTAACATCGGGCAATGTCCAAGTTATAAACATCAACATCTCCCAAGGTCAATCAGATATGTTGATTTTTGTCTCCAAATATTGTTATAATAGTAGCTATGGTAACAACGCTGTAAGTAGCCAACCCAGCGGGCTCATAAGTAGTTCTTCTTTCACCATTTCGAGCAAAGACAACAAGTTCATAAGTGTTGGCTGCGATACTTACGGCTATCTTAATAGCTTCTACAACAACAATGCAGGTTATTCAACAGGGTGCTTAACAAGATGTTATGGCAACACTAAGGAAATCAAGGATGGAGATTGTTCCGGTATTGGGTGCTGTGAGGTGGATATTCCTCCCAAGATGAGATCGGTCTCAACTCAAGCAGGTACCTTTTTCAATTTCCAGGATTCTCTGGTCTTCAACAACTGTAGCTATTCCTTTGTTGTCAAGAATGGCAACTACACGTTTAAGAAGGCCCACTTAGGGAAACTATTACATGAGACGTTCCCTGTGGTGTTCAATTGGAGTGTTGGAAACGAGACATGTAAAGAATCTCAAAACAGAGGTACCAACATTTGCAAGGGAAATAGTATTTGTATGGATGCAGAAAGTGGATATGGTTACCGGTGTCAATGCCAGAAAGGTTTTGAAGGAAATCCATACCTTCATAATTGCACAGATATTGATGAATGTGAGACGGGACAACATTCATGTGCAAGTAAACATAATTGTCGCAATGAAATTGGATTCCACGGATGCTTTTGTCCTAACGGACAATCAGGAAATGGATCAACAATAGAAGGGTGCCACAAGAAAAATTTGCTTCCACAAATTGTGATTGGTGCAAGTGCAGGATTCATAGCTATTTTTGTGGGAACTTCTTTGCTATACTTAACACACCAAAAGAGAAAATTCATCAAACTTAAAGAGAAGTTTTTTAAGCAAAATGGTGGTCTTCTTTTGCTACAACAACTCTCTTCAAGAGAAGAATCCTCCCATACTATTCAAATTTTCACCGCCAAAGAATTGAAGAAGGCCACCAACAACTATGATGAGAACTTAATCATTGGCAGGGGAGGTTTCGGCACAGTTTTCAAAGGAGTTCTAGAGAATAACACAATTGTTGCTATCAAGAAGTCCAGAATAGTTGATGCTGACCAAGTTGATCAATTCATCCACGAGGTTATCGTTTTGTCCCAAGTTAACCACAGAAATGTGGTGAAGCTTTTGGGTTGTTGTTTAGAAACAGAAGTCCCTCTTCTTGTCTATGAGTTTGTAAGGAATGGCACACTTTTCGATTTCATCCATAATGAAAACAAGAGAAATCATTTCAATTGGGAAAATCGTCTCAGAATTGCAACAGAGACAGTCGGAGCTTTATCATATCTTCATTCATCTGCTTCCATTCCAattgtccacagagatgttaagagtactaacattctcttagacgaagattacactgccaaagtctctgactttggagcttcaaaatttgTTCCATTGAATCAAAATACATTAGCTACAGTGGTGCAAGGAACTTTTGGTTACTTGGATCCAGAATACATGCAAACTTGCCAACTAACTGAAAAAAGTGATGTGTATAGCTTTGGTGTTGTGCTCGCTGAGCTTCTTACGGGAAAGAAACCTCTTATGTTTGAGAAGTCGGAAGAGAAAACAAATCTTGCTATGTACTTGACATCTTGCCTGGAAGAGGATCGCTTGTTTGAAGCTCTTCAAGTTGGAATCTTGAACGAAGAAAATAAACAAGAGATTGTGGAAGTTGCTATTGTTGCAGCAAAGTGTTTGAGACTTAAAGGCGAAGAAAGGCCAAGCATGAAGGAAGTGGCAATGGAATTAGAGGGAATAAGGTTAATGTCAAAGTCCCACTGGGTTAATAATGCAGACAAGAATTTTGAAGAGATCCAGCACTTGCTTCCAGTGTCATCATCGTCAGAAAAATATGAGCATGGTGATAGCAGCAGTGGCAGTCATCAAAATACCAAATATGATAGTATCATCAGGGATCAAGAAGTGCTAATTGCCTTGCCAAGTGGAAGGTGA	2280	0.3781	MGVKGMLFVIVALVLVEVEVEVVAIDDIDSTQIALHGCQRNCGDVQIPYPFGIGKTENGTTCFLDKPFNLTCNSSSSSLTSGNVQVININISQGQSDMLIFVSKYCYNSSYGNNAVSSQPSGLISSSSFTISSKDNKFISVGCDTYGYLNSFYNNNAGYSTGCLTRCYGNTKEIKDGDCSGIGCCEVDIPPKMRSVSTQAGTFFNFQDSLVFNNCSYSFVVKNGNYTFKKAHLGKLLHETFPVVFNWSVGNETCKESQNRGTNICKGNSICMDAESGYGYRCQCQKGFEGNPYLHNCTDIDECETGQHSCASKHNCRNEIGFHGCFCPNGQSGNGSTIEGCHKKNLLPQIVIGASAGFIAIFVGTSLLYLTHQKRKFIKLKEKFFKQNGGLLLLQQLSSREESSHTIQIFTAKELKKATNNYDENLIIGRGGFGTVFKGVLENNTIVAIKKSRIVDADQVDQFIHEVIVLSQVNHRNVVKLLGCCLETEVPLLVYEFVRNGTLFDFIHNENKRNHFNWENRLRIATETVGALSYLHSSASIPIVHRDVKSTNILLDEDYTAKVSDFGASKFVPLNQNTLATVVQGTFGYLDPEYMQTCQLTEKSDVYSFGVVLAELLTGKKPLMFEKSEEKTNLAMYLTSCLEEDRLFEALQVGILNEENKQEIVEVAIVAAKCLRLKGEERPSMKEVAMELEGIRLMSKSHWVNNADKNFEEIQHLLPVSSSSEKYEHGDSSSGSHQNTKYDSIIRDQEVLIALPSGR	759

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu06g02796	759	Gene3D	Transferase(Phosphotransferase) domain 1	498	717	-	-
	Adu06g02796	759	ProSiteProfiles	EGF-like domain profile.	257	298	IPR000742	-
	Adu06g02796	759	ProSiteProfiles	EGF-like domain profile.	299	337	IPR000742	-
	Adu06g02796	759	Gene3D	Laminin	251	341	-	-
	Adu06g02796	759	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	543	555	IPR008271	GO:0004672\|GO:0006468
	Adu06g02796	759	Pfam	Wall-associated receptor kinase galacturonan-binding	38	93	IPR025287	GO:0030247
	Adu06g02796	759	SUPERFAMILY	EGF/Laminin	299	334	-	-
	Adu06g02796	759	Pfam	Calcium-binding EGF domain	299	334	IPR001881	GO:0005509
	Adu06g02796	759	Pfam	Protein kinase domain	424	688	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu06g02796	759	ProSitePatterns	EGF-like domain signature 2.	282	297	IPR000742	-
	Adu06g02796	759	CDD	STKc_IRAK	428	695	-	-
	Adu06g02796	759	Gene3D	Phosphorylase Kinase; domain 1	394	497	-	-
	Adu06g02796	759	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21	18	721	IPR045274	GO:0007166
	Adu06g02796	759	ProSitePatterns	Protein kinases ATP-binding region signature.	428	451	IPR017441	GO:0005524
	Adu06g02796	759	SMART	serkin_6	422	695	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu06g02796	759	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2	18	721	-	-
	Adu06g02796	759	ProSiteProfiles	Protein kinase domain profile.	422	704	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu06g02796	759	SUPERFAMILY	Protein kinase-like (PK-like)	399	693	IPR011009	-
	Adu06g02796	759	MobiDBLite	consensus disorder prediction	722	741	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu06g02796	Adu-Chr6	105146991	105149732	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu06g02796	38	745	Receptor kinase-like Gene Family	AT1G21230	46.814	0.0	613

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK	Adu06g02796		Pkinase	3e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu06g02796	-		-	adu:107495457	902.123