Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02761 ATGGGAGAGGTGGCAGTAATGCGCTCTGAGCCACTGCAGTTTGAGTGCAATGATATGAAGCATCTGACAGAGGGAGACGCTTATGCCACAGAATCAAATGCAGAGATTGATCATAGGGAAGAATCAAGCCAATCAACTGATCATGAAAAGACTAATGACTTGCGTGAGAAAGGATACATGGAGTACGGATGTCAACATTATCGGAGAAGATGCTGTATCAGGGCCCCTTGTTGCAATGAGGTTTTTGATTGCCGCCACTGTCACAATGAGGCAAAAAATGATATCAGCATTGACCAGAAACTTAGACATGACATTCCGCGCCACCAAGTCAAACAGGTGATATGTTCACTTTGTGGGACAGAACAAGAGGTGCAGCAGAACTGTATCAATTGTGGTGTATCAAAGCAACAATATCATTGCGATGGATGTGGAATTTGCAGAACTGGAGGACGTGAGAATTTCTTCCACTGCTACAAGTGTGTAGGTTGTTGCTATTCAATCCTGCTAAAAGATAGTCACCCTTGCATTGAAGGAGCAATGCATCATGATTGCCCCGTTTGTTTTGAGTATTTGTTTGAATCCAGAAATGATGTCACTGTTATGCCCTGTGGACATACAATCCATAAGAGCTGCTTGGATGAAATGAGAGAACATTACAAATATGCATGCCCTCTGTGCTCAAAGTCGGTGTGCGATATGTCGAAGGTTTGGGAGAAATTTGACTTGGAGATGGCTGCTATACCGATACCTGAACCATATCAGAATAAAATGGTTTGGATCTTGTGCAATGATTGTTGCAAAACATCTCGAGTTCAGTTCCATTTTGTGGCTCAAAAATGTTTGAACTGCAAATCCTACAACACACGACAGACCCGAGGCCGAGACTGCTGA 891 0.4321 MGEVAVMRSEPLQFECNDMKHLTEGDAYATESNAEIDHREESSQSTDHEKTNDLREKGYMEYGCQHYRRRCCIRAPCCNEVFDCRHCHNEAKNDISIDQKLRHDIPRHQVKQVICSLCGTEQEVQQNCINCGVSKQQYHCDGCGICRTGGRENFFHCYKCVGCCYSILLKDSHPCIEGAMHHDCPVCFEYLFESRNDVTVMPCGHTIHKSCLDEMREHYKYACPLCSKSVCDMSKVWEKFDLEMAAIPIPEPYQNKMVWILCNDCCKTSRVQFHFVAQKCLNCKSYNTRQTRGRDC 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02761 296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 229 IPR013083 -
Adu06g02761 296 Gene3D - 255 296 - -
Adu06g02761 296 SMART ring_2 184 226 IPR001841 -
Adu06g02761 296 MobiDBLite consensus disorder prediction 33 52 - -
Adu06g02761 296 Pfam Ring finger domain 183 226 IPR001841 -
Adu06g02761 296 ProSiteProfiles Zinc finger CHY-type profile. 57 133 IPR008913 GO:0008270
Adu06g02761 296 Pfam Zinc-ribbon 231 289 IPR039512 -
Adu06g02761 296 Pfam CHY zinc finger 64 144 IPR008913 GO:0008270
Adu06g02761 296 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 25 293 - -
Adu06g02761 296 SUPERFAMILY Zinc hairpin stack 128 177 IPR037275 -
Adu06g02761 296 SUPERFAMILY CHY zinc finger-like 61 133 IPR037274 GO:0008270
Adu06g02761 296 SUPERFAMILY RING/U-box 183 232 - -
Adu06g02761 296 PANTHER CHY-TYPE/CTCHY-TYPE/RING-TYPE ZINC FINGER PROTEIN 25 293 - -
Adu06g02761 296 ProSiteProfiles Zinc finger CTCHY-type profile. 110 183 IPR017921 -
Adu06g02761 296 ProSiteProfiles Zinc finger RING-type profile. 184 227 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02761 Adu-Chr6 104578251 104581343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02761 62 293 C2H2 Transcription Factor Family AT3G18290 36.364 4.67e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02761 K10144 - gmx:100803569 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02761 06 104578251 104581343 Adu08g02447 08 40244028 40250370 PCT