Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02744 ATGTTCTCTGGCTCCCAGTTCGACGCCACCACCGCCTTCTCCGGCGGCGGTTTCATGGCATCCCAATCCACCAACCTCAATGATTCATCCCCTTCCGCCGCTAAAAGCCGTGAAACTCAGGGTTTGATTCCGGTGACAGTGAAGCAGATAAGTGAAGCTTCGCATTCTGGTGATGAAAAATCGAATTTTGTGATTAACGGTATTGATGTAAACAATGTTACATTGGTTGGAATGATGTTTGAGAAAGCTGAGAGAACCACTGATGTTAATTTTGTTTTGGATGATGGAACTGGACGAATCAAATGCCGAAGATGGGTCAATGAGGCTTTTGACACCAAAGAAATGGAAGAAGTACAGGATGGTATGTATGTTCGTGTTTATGGCCACTTGAAAAGCTTTCAAGGTGTGAAGCAGCTTGTTGTCTTCTCAGTCAGGCCTGTGACAAATTTTGACGAGATCTCATTTCACTTTATTGATTGCATACATAATCACCTCCACACCAAAGTAAAGGCAGAAGGAATCACTCCTGCAAATCCTTCATCAGGCTCATCTTTGATCACTCCTGTCAAAAATGCATCGAATGGTTCACAGGAACCGTCATCTAATCCAGGGTATGCTCAGTATAGTGTGGATGGACTCAAGGATTGTGATAAATTGGTTATGGACTATCTGCAACAGCATTCAGACATGTCGGATGAACGAGGAATACATGTCAATGAACTATCTCGAGAACTTAAGCTTCCAATGGACAAGATCATGTTGTCTCTAAAGACTCTCGGAGATGATGGTTTAGTGTACTCCACCATAGATGACTACCATTACAAACAAGCTTGA 834 0.4293 MFSGSQFDATTAFSGGGFMASQSTNLNDSSPSAAKSRETQGLIPVTVKQISEASHSGDEKSNFVINGIDVNNVTLVGMMFEKAERTTDVNFVLDDGTGRIKCRRWVNEAFDTKEMEEVQDGMYVRVYGHLKSFQGVKQLVVFSVRPVTNFDEISFHFIDCIHNHLHTKVKAEGITPANPSSGSSLITPVKNASNGSQEPSSNPGYAQYSVDGLKDCDKLVMDYLQQHSDMSDERGIHVNELSRELKLPMDKIMLSLKTLGDDGLVYSTIDDYHYKQA 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02744 277 Pfam OB-fold nucleic acid binding domain 73 146 IPR004365 GO:0003676
Adu06g02744 277 SUPERFAMILY Nucleic acid-binding proteins 42 166 IPR012340 -
Adu06g02744 277 MobiDBLite consensus disorder prediction 174 206 - -
Adu06g02744 277 PANTHER REPLICATION PROTEIN A-RELATED 1 277 IPR040260 -
Adu06g02744 277 PIRSF RPA32 1 277 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu06g02744 277 CDD RPA2_DBD_D 72 165 - -
Adu06g02744 277 SUPERFAMILY "Winged helix" DNA-binding domain 211 275 IPR036390 -
Adu06g02744 277 Pfam Replication protein A C terminal 184 271 IPR014892 -
Adu06g02744 277 Gene3D - 207 277 IPR036388 -
Adu06g02744 277 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 1 277 - -
Adu06g02744 277 Gene3D - 38 169 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02744 Adu-Chr6 104357019 104361013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02744 1 275 Core DNA Replication Machinery Family AT2G24490 48.201 5.58e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02744 K10739 - gmx:100802512 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02744 06 104357019 104361013 Adu06g02744 06 104357019 104361013 ECH