Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02701 ATGAATGGTGACGGGAAAATCCCTGTTGCTCCATCGGAGGAACACATTGATGGTGCTCAGAAGAATAGAGCATTGCATGGGAGGACTACTGGTCCAACAAGGCGTTCTACAAAAGGGAATTGGACACCTGAACAGGATGAGATCTTGCGGAAGGCTGTTCAGCATTTCAAAGGAAAGAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAATGCCTACATAGGTGGCAGAAAGTCTTAAATCCTGATCTTGTCAAGGGCCCATGGTCTAAGGAGGAAGATGAAGTAATTATTGAATTGGTGAATAAATATGGACCTAAAAAATGGTCTACTATTGCTCATCATTTACCAGGACGCATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTGGTATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTGACCTTAATCCGTGCTCATCAAATTTATGGAAACAAATGGGCTGAATTAACGAAGTTCTTGCCTGGGAGGACAGATAATTCTATTAAGAACCATTGGCACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCATCAGGGTTGCTTGCTCAGTTTCAATCTGCACCACTTGCTGGAAATCCTGATCAACAGATGGTTTTAACTTCAGAGATGCACTCCGTTGGAGATGGTAATGGTCCTAAGAGGACTGATAGAGAGGATGTTTCAGAGTGTAGCCAAGAATCAGCTGATTCTGCTGGATTGACTAGTAATCTTGATCTACAAACTCGAGAGGTGTATAAGCCAGAGGAAGAATCTATTCTAGGAAAGGATCATAATCTGAGTCAAGCATCCTGTCCACAGCATTACTACATATCTCTTGATGATGTGGATATCTGCATCCCAGAAGTTGCTTGCCAAGATGCTTGCTCTTCTCAATTTGCTGAGCAGATATGCTCACACAAATCTGGAAATGCCCTAACTGGGGATTACCAGTTTAATTGTGTGGATAATAGTGAAATGTGTAACATGGTAAATGTTCCCTTTCAGACTGAGGGGTTAGGTATTTCAACTTTGATGAGACCTGCATCTATGGATCCTGCTAAGCCAAATAACATGTCAATATCTGAGGATGAATGTTGCAGATTCCTATTTTCGGAGGCAGTTAGTGATGGATGCTTTTCTCCCAGAGTTTATATTAAAGACGTGGACATGGTTGATTTTTCTGGATGCAATATGGATCATCAAATTGTCTCTGGTGGACCTGATAATGTCATTTCTTCTAATGGCACATCCAGTTCTCCTTGTGTTGACAATATAGATAGTGAAGTAAAGCAAGAGCCACCAGAAACTCCAAAGGATTCTTCAAAATTGGTCCCTGTAAATAGTTTTGGTTATGGATCAAACTCTAAGGTAACTTGTTATGCAAAATATGAGAAGTTGAATGAGCATTCAAAAAAGGAAGATACAGGAACTTTATGCTACCAACCGCCCTGTTTTCCAAGCTTGGATATTCCTTTCCTAAGCTGTGATCTTGCACAATCTGAGCCTGATATGCAGCAAGAATTTAGTCCCCTTGGTATCCGCCAGCTTCTGATGTCTCCTGTGAGCTGTCTAACTCCTTTCAGGTTGTGGGACTCACCCTCTGGTGGTGATAATCTAGATGCCTTGTTTAAAAGTGCAGCCAAAACTTTTACTGACATGCCATCCAGCTTGATAAAAAGCTTTTCCAGCTTGGACTTTATGTTTGATGACAATGAGAATCGGGAGGCAGATATGATTTCTCCAACTTCATTACAAAAATGGAGCATTGCTGTGTCTGTTGATGATGATAAAGAAAATTGTGGTCAAACTGTTAAAGATAAACAAGTAGAAGAGAAAAATAATTCTGCCAATTTGGACGAAAATAACAGAGAAAATGGGACTGTAAAAAATAGCTCTCAGGATAGCCTTAAGCATCAAGTTGATTCAAAGATGAAGAAGATTGATATTGACACTGATAATGATGATGATAACGATAATGATAATGTTGAACAGCCTTCTGGAATTTTGATTGAACGTAATATGAATGACATAGCACCAAATTCTCCTGGATTAGACACAGTTCTAGGTTCAAGTGCTCGAACTCCCAAGAACTTGAGCAATAGGAGGTTGGAAGCAGTTCCGAATCAGCGCAGTCCATGCTCAAGGGTCAAGTGTGTCCGGGCAAAGGAGCATGAAAAACTTTCAGTTGATGTCACTTGTGTAGGGACGACTTCAGGGAAACAAGCCAAAAATGATGGTGGTTTTGAAACAAGTAGCATATTTGGTGACACTCCTTTTATGAAAAGCATTAAATCACCTTCTGCATGGAAATCTCCATGGTTCATCAACGCAACATTTCTGTGCAGCCCCAGGATTGCTACTGAAATTGCAATTGAGGATTATGGGTACTTAATGAGCTCAGGCAATAGAAGCTATGACGCCATCGGTTTGATGAAACAGATCAGTGAAAAAACTGCTGCTACATATGCTAATGCTCAAGAAGTTTTGGAAAATAAAACTCCTAAAGCTTTGCCTAAAAATGCATCTTTAAATGACAAAGAAGGTGGTCAGGAAGATAATGATCTGCAGAAACAGCCTGCTAAGCATTCTCAGATGGAACGACGCATACTTGACTTTAGTGAATGTGAAACAACACCAAGCAAAGGTGATAACAGCAAATCCTCACCTGTGAACTTCTCAAGCCCTTCTTCATATTTGTTGAAGGGTTGTAGATAA 2751 0.4028 MNGDGKIPVAPSEEHIDGAQKNRALHGRTTGPTRRSTKGNWTPEQDEILRKAVQHFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPDLVKGPWSKEEDEVIIELVNKYGPKKWSTIAHHLPGRIGKQCRERWHNHLNPGINKEAWTQEEELTLIRAHQIYGNKWAELTKFLPGRTDNSIKNHWHSSVKKKLDSYLASGLLAQFQSAPLAGNPDQQMVLTSEMHSVGDGNGPKRTDREDVSECSQESADSAGLTSNLDLQTREVYKPEEESILGKDHNLSQASCPQHYYISLDDVDICIPEVACQDACSSQFAEQICSHKSGNALTGDYQFNCVDNSEMCNMVNVPFQTEGLGISTLMRPASMDPAKPNNMSISEDECCRFLFSEAVSDGCFSPRVYIKDVDMVDFSGCNMDHQIVSGGPDNVISSNGTSSSPCVDNIDSEVKQEPPETPKDSSKLVPVNSFGYGSNSKVTCYAKYEKLNEHSKKEDTGTLCYQPPCFPSLDIPFLSCDLAQSEPDMQQEFSPLGIRQLLMSPVSCLTPFRLWDSPSGGDNLDALFKSAAKTFTDMPSSLIKSFSSLDFMFDDNENREADMISPTSLQKWSIAVSVDDDKENCGQTVKDKQVEEKNNSANLDENNRENGTVKNSSQDSLKHQVDSKMKKIDIDTDNDDDNDNDNVEQPSGILIERNMNDIAPNSPGLDTVLGSSARTPKNLSNRRLEAVPNQRSPCSRVKCVRAKEHEKLSVDVTCVGTTSGKQAKNDGGFETSSIFGDTPFMKSIKSPSAWKSPWFINATFLCSPRIATEIAIEDYGYLMSSGNRSYDAIGLMKQISEKTAATYANAQEVLENKTPKALPKNASLNDKEGGQEDNDLQKQPAKHSQMERRILDFSECETTPSKGDNSKSSPVNFSSPSSYLLKGCR 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02701 916 Gene3D - 90 141 - -
Adu06g02701 916 SUPERFAMILY Homeodomain-like 36 98 IPR009057 -
Adu06g02701 916 MobiDBLite consensus disorder prediction 222 258 - -
Adu06g02701 916 MobiDBLite consensus disorder prediction 857 886 - -
Adu06g02701 916 Pfam Myb-like DNA-binding domain 38 84 IPR001005 -
Adu06g02701 916 Pfam Myb-like DNA-binding domain 142 184 IPR001005 -
Adu06g02701 916 Pfam Myb-like DNA-binding domain 90 136 IPR001005 -
Adu06g02701 916 SUPERFAMILY Homeodomain-like 87 183 IPR009057 -
Adu06g02701 916 MobiDBLite consensus disorder prediction 228 243 - -
Adu06g02701 916 Gene3D - 143 202 - -
Adu06g02701 916 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Adu06g02701 916 SMART sant 37 86 IPR001005 -
Adu06g02701 916 SMART sant 89 138 IPR001005 -
Adu06g02701 916 SMART sant 141 189 IPR001005 -
Adu06g02701 916 MobiDBLite consensus disorder prediction 648 664 - -
Adu06g02701 916 PANTHER TRANSCRIPTION REPRESSOR MYB5 9 409 - -
Adu06g02701 916 PANTHER TRANSCRIPTION REPRESSOR MYB5 495 570 - -
Adu06g02701 916 MobiDBLite consensus disorder prediction 843 916 - -
Adu06g02701 916 MobiDBLite consensus disorder prediction 1 41 - -
Adu06g02701 916 CDD SANT 92 136 IPR001005 -
Adu06g02701 916 Gene3D - 37 89 - -
Adu06g02701 916 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 84 IPR017930 -
Adu06g02701 916 MobiDBLite consensus disorder prediction 620 676 - -
Adu06g02701 916 MobiDBLite consensus disorder prediction 631 647 - -
Adu06g02701 916 PANTHER MYB PROTEIN-RELATED 563 915 - -
Adu06g02701 916 ProSiteProfiles Myb-like domain profile. 85 136 IPR001005 -
Adu06g02701 916 PANTHER TRANSCRIPTION REPRESSOR MYB5 563 915 - -
Adu06g02701 916 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 140 IPR017930 -
Adu06g02701 916 CDD SANT 40 84 IPR001005 -
Adu06g02701 916 MobiDBLite consensus disorder prediction 244 258 - -
Adu06g02701 916 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 191 IPR017930 -
Adu06g02701 916 PANTHER MYB PROTEIN-RELATED 495 570 - -
Adu06g02701 916 PANTHER MYB PROTEIN-RELATED 9 409 - -
Adu06g02701 916 MobiDBLite consensus disorder prediction 889 910 - -
Adu06g02701 916 CDD SANT 144 184 IPR001005 -
Adu06g02701 916 ProSiteProfiles Myb-like domain profile. 137 187 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02701 Adu-Chr6 103451158 103455930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02701 1 916 MYB Transcription Factor Family AT4G32730 38.634 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu06g02701 Myb_DNA-binding 7.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02701 - K09420 aprc:113848458 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02701 06 103451158 103455930 Adu06g02701 06 103451158 103455930 ECH
Adu06g02701 06 103451158 103455930 Adu08g00873 08 16275302 16276348 PCT