Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02667 ATGGCTGTTGCTGAGAATGCCGGGGCCAAAATCGGTGCTTCAAGTGAAGATTTGGAAAAAAGTGTAGTGTCATCTGACTCAAATGCCCCAAACGAAGAACTGGAGAAACCGAAACCCCGAAATGGTTCTGTTGGAAACGGTGTAGAGACCGATCAGAATCTCAACGGTGTTGATGGCGTTGCAGCCACTGTCTCAGTCCCTAACGGCAATCACAAACCCCAAATGGGTCAGATGCAAAATGGTTTGGACACAAACGGTGGTGGTGTCCAGGGGCAGCAGGTTGTGGCGAACAATGGCGGCAGCGGAGGTGGGTTTAAGATGGGCCATCAGATAGGTAATGGAGTGATGAATGGAGGAGAGGACGGCGAGAGCTTCAAACGCGAAATGAGGGATTTGGCTGAGCTCTTGTCAAAGTTGAACCCTATGGCTGAGGAGTTTGTGCCCTCTTCACTTGCAAAGAATCATGGGTACTTGCCCGGAGCTGGAGGGTTTGGTTTCCCTAACAATTTGCTACTTCCTGCAAATTTTGGCAATGCTAATGGACAGCCTAATAGAAGGAGAAAGAATGGCTACAATAACCAGGGGAAGCAAAGAGCAAATCATAAAATAGAAATGGAGAGACGGGAAGAGATGATTAGGAGGACTGTTTATGTCTCCGATATTGATCAACAAGTAACTGAAGAGCAACTGGCAGCTCTCTTTCTTAACTGTGGCCAGGTCGTTGATTGCCGTGTATGCGGGGATCCAAATTCTATTCTTCGTTTTGCCTTCATTGAGTTTACGGATGAAGATGGTGCAAGAGCTGCTTTGAACTTGTCTGGCACCATGCTTGGATATTACCCGGTGAGAGTGCTGCCATCTAAAACTGCCATTGCACCTGTTAATCCGTCATATTTGCCCAGGTCTGAAGATGAAAGGGAGATGTGCTCAAGAACTATTTATTGCACAAATATTGACAAAAAGGTTACTCAAGCTGACGTTAAACTCTTCTTTGAATCTCTTTGTGGAGAGGTTCAACGCTTGAGGCTTCTTGGGGATTACCATCATTCGACTCGAATTGCATTTGTCGAGTTCACAATATCGACATAA 1089 0.461 MAVAENAGAKIGASSEDLEKSVVSSDSNAPNEELEKPKPRNGSVGNGVETDQNLNGVDGVAATVSVPNGNHKPQMGQMQNGLDTNGGGVQGQQVVANNGGSGGGFKMGHQIGNGVMNGGEDGESFKREMRDLAELLSKLNPMAEEFVPSSLAKNHGYLPGAGGFGFPNNLLLPANFGNANGQPNRRRKNGYNNQGKQRANHKIEMERREEMIRRTVYVSDIDQQVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFIEFTDEDGARAALNLSGTMLGYYPVRVLPSKTAIAPVNPSYLPRSEDEREMCSRTIYCTNIDKKVTQADVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTIST 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02667 362 Gene3D - 177 291 IPR012677 -
Adu06g02667 362 MobiDBLite consensus disorder prediction 178 200 - -
Adu06g02667 362 Pfam Ataxin-2 C-terminal region 136 150 IPR009818 -
Adu06g02667 362 MobiDBLite consensus disorder prediction 178 198 - -
Adu06g02667 362 Gene3D - 304 361 IPR012677 -
Adu06g02667 362 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 214 289 IPR000504 GO:0003723
Adu06g02667 362 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 361 - -
Adu06g02667 362 SMART rrm1_1 215 285 IPR000504 GO:0003723
Adu06g02667 362 MobiDBLite consensus disorder prediction 1 56 - -
Adu06g02667 362 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 12-LIKE 1 361 - -
Adu06g02667 362 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 311 362 IPR000504 GO:0003723
Adu06g02667 362 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 216 278 IPR000504 GO:0003723
Adu06g02667 362 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 313 359 IPR000504 GO:0003723
Adu06g02667 362 CDD RRM1_CID8_like 212 291 IPR034823 -
Adu06g02667 362 SUPERFAMILY RNA-binding domain, RBD 214 358 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02667 Adu-Chr6 102829537 102834799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02667 213 358 Eukaryotic Initiation Factors Gene Family AT1G34140 24.161 1.85e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02667 - - aip:107622933 484.182