Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02639 ATGGAAACAGAGAAGCTTCCAGCAATGGATAATAACACCTTACTATCTGAAACTTTCTTGAACACAACACAGTTTGGTGGAGAAGATCTGTTTTCCATTTTAGAGAGCCTTGAAGACTTGAATAGTCCTCCTCCTCCTCCAAGGAAGAGACAGAAGGTTACTGACGCTGATGGAGAAGAAAGGGTATTATCGTCACATATAACTGTTGAGCGCAACCGGAGAAAGCAAATGAATCACCATTTGTCTGTGTTGAGGTCACTTATGCCCTCCTTTTATGTCAAACGAGGAGATCAAGCATCAATAATTGGAGGTGTAGTTGATTACATCAACGAATTGCAACAAGTTCTACAATGCCTAGAGGCCAAGAAAAATAGAAAGGTATTTTACACGGATAACGTACTAAGCCCAAGATTAATTATTCCAAGCCCAAAATTAGGCCCAAGAATACTAACCCTGCCGCCCATTAGTCCAAGAACTCCACAACCTGGAAGCCCATGGTTGCACTCCATTGAGCCTTCTCCTTCTTCTTCTGGATCTGATAATATGAATGAGCTTGTTGCGAATTCAAAGTCGATGATTGCTGACGTGGAGGTTAAGTTTTGCGGTCCGCATGTATTAGTGAAAACTGTCTCCCCGAGAATTCCTGGGCAAGCCATGAGGATAGTATCAGCGCTTCAAGACCTTGCTCTTGAGATTCTTCATCTCACCATTACCACTTCTGATGAAACCATGCTATACTCTTTCACTATTAAGATTGGGATTGAATGCCAACTGAGTGCGGAAGAACTAGCTCAACATATCCAGCAAACATTCTGCTAA 819 0.4225 METEKLPAMDNNTLLSETFLNTTQFGGEDLFSILESLEDLNSPPPPPRKRQKVTDADGEERVLSSHITVERNRRKQMNHHLSVLRSLMPSFYVKRGDQASIIGGVVDYINELQQVLQCLEAKKNRKVFYTDNVLSPRLIIPSPKLGPRILTLPPISPRTPQPGSPWLHSIEPSPSSSGSDNMNELVANSKSMIADVEVKFCGPHVLVKTVSPRIPGQAMRIVSALQDLALEILHLTITTSDETMLYSFTIKIGIECQLSAEELAQHIQQTFC 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02639 272 PANTHER TRANSCRIPTION FACTOR FAMA 51 272 IPR044283 GO:0003700|GO:0010052
Adu06g02639 272 Gene3D - 53 126 IPR036638 GO:0046983
Adu06g02639 272 PANTHER TRANSCRIPTION FACTOR SPEECHLESS 51 272 - -
Adu06g02639 272 MobiDBLite consensus disorder prediction 38 60 - -
Adu06g02639 272 SMART finulus 67 118 IPR011598 GO:0046983
Adu06g02639 272 MobiDBLite consensus disorder prediction 153 181 - -
Adu06g02639 272 Pfam Helix-loop-helix DNA-binding domain 65 113 IPR011598 GO:0046983
Adu06g02639 272 MobiDBLite consensus disorder prediction 162 181 - -
Adu06g02639 272 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 61 112 IPR011598 GO:0046983
Adu06g02639 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 127 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02639 Adu-Chr6 102324474 102327382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02639 14 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 43.658 3.51e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu06g02639 HLH 4.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02639 K20558 - gmx:100809717 312.383