Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02587 ATGAGCCAGTGTGTTCCCAGCTGGGAGGTGGAGGATACCAATCCACCGCCCCCAAGACCCTCTCTACGTTCCAACTCCAACTCAACCATCCCTGACGTTCCCATGTTAGACTATGAAGTCGCAGAACTAACATGGGAAAATGGACAGCTATCAATGCATGGGTTAGGGTTCCCGCGAGTGCCGACGAAATCCTCGGCGGTTACAACAACCGCCAATAAGTACACATGGGAAAAGCCTCGTGCAAGTGGCACATTGGAATCCATAGTCAACCAAGCAACTACCACACCCCAAAACGCCAAATCAACAACCTTCCACGGTTTCGGCGGTGGTGGCAACGGAGGCGGTGTCTATGAAAATCTGTTAGTCCCGTGGGTTGATCCCCACCGTGTCCCGGCCACCGTTATTTCTCCGGGAACTTCAAACACCATGACCATGGACGCGCTGGTACCGTGCTCAAACCGGGTAGAGGAGCAAAGAACGCCGCAAGTTATGGACTCCATCTCCGGAGGGCTTGGACCGTGCATGGCGGGTCGCACCACACGTATGGGCAGCGGTGATGCCAAAGATGGAGGCGCCCTTGAAAAGCGCGCCGCCATGGTGAGACGTGTGCCGGCACCGACGGTGTCGGCACATGAGATGAGTAGCAGGGATCAGAGTGTGAGTGGCAGCGCCACCTTTGGGAGGGAAAGCCGGCACGTGACACTTGACACGTGCGAGAGGGAGTTCGGAGTGGGTTTCACTACTTCGACGTCGATGGGGTCGCCGGAAAATACAAGCTCTGCAAAGCAGTGCACCAAGACCAACACCATTGACGACCATGATTCCGTTTGCCACAGTAGATCAATGAAGAAGAAAGAAACTGGAAAATCTTCTCTGTCCACTAAAAGGAGTAGAGCCGCAGCTATACACAACCAATCTGAAAGGAAAAGGAGGGATAAGATAAACCAAAGGATGAAGACATTGCAAAAGCTGGTCCCAAATTCTAGCAAGACGGACAAAGCTTCAATGTTGGATGAAGTGATAGAATATCTTAAACAGTTGCAAGCACAAGTGCAGATGGTGAACAGGATCAACATGTCATCCATGATGCTTCCCATGACCATGCAACAACAGCTTCAAATGTCAATGATGGCTCCCATGGGCATGGGAATGGGGATGGGCATGGGCATGGGCATGGCGGGGATGGGCATGGGGATGGATATGAACACCCTTAGTCGCACTAATATCCCTCCTGGAATCCCTCCAGTCCTCCACCCTTCTCCCTTCATGCCTATGCCTTCTTGGGATGCTGCTGCTACCGCCACTGCTGCCGCCGCAACTGGAGCTGCCGACCGACTTCAAGGACCTACACCCTCCGCCATGCCTGATCATTTATCCTCATTTTTCGGATGTCCATCACAGCCCATGAGCATGGATGCCTACAGTAGGATTGCCGCCATGTACCAGCAGCTTCAGCACCAACAACCTCCCCCTTCAGGTTCCAATAAGACCTGA 1494 0.5308 MSQCVPSWEVEDTNPPPPRPSLRSNSNSTIPDVPMLDYEVAELTWENGQLSMHGLGFPRVPTKSSAVTTTANKYTWEKPRASGTLESIVNQATTTPQNAKSTTFHGFGGGGNGGGVYENLLVPWVDPHRVPATVISPGTSNTMTMDALVPCSNRVEEQRTPQVMDSISGGLGPCMAGRTTRMGSGDAKDGGALEKRAAMVRRVPAPTVSAHEMSSRDQSVSGSATFGRESRHVTLDTCEREFGVGFTTSTSMGSPENTSSAKQCTKTNTIDDHDSVCHSRSMKKKETGKSSLSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMVNRINMSSMMLPMTMQQQLQMSMMAPMGMGMGMGMGMGMAGMGMGMDMNTLSRTNIPPGIPPVLHPSPFMPMPSWDAAATATAAAATGAADRLQGPTPSAMPDHLSSFFGCPSQPMSMDAYSRIAAMYQQLQHQQPPPSGSNKT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02587 497 Pfam Helix-loop-helix DNA-binding domain 303 348 IPR011598 GO:0046983
Adu06g02587 497 PANTHER TRANSCRIPTION FACTOR UNE10 1 494 - -
Adu06g02587 497 MobiDBLite consensus disorder prediction 211 228 - -
Adu06g02587 497 MobiDBLite consensus disorder prediction 205 228 - -
Adu06g02587 497 SMART finulus 304 353 IPR011598 GO:0046983
Adu06g02587 497 Gene3D - 293 358 IPR036638 GO:0046983
Adu06g02587 497 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 1 494 IPR031066 -
Adu06g02587 497 CDD bHLH_AtPIF_like 298 359 - -
Adu06g02587 497 MobiDBLite consensus disorder prediction 1 31 - -
Adu06g02587 497 MobiDBLite consensus disorder prediction 246 266 - -
Adu06g02587 497 MobiDBLite consensus disorder prediction 246 313 - -
Adu06g02587 497 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 298 347 IPR011598 GO:0046983
Adu06g02587 497 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 296 360 IPR036638 GO:0046983
Adu06g02587 497 MobiDBLite consensus disorder prediction 267 292 - -
Adu06g02587 497 Coils Coil 304 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02587 Adu-Chr6 101325501 101332529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02587 1 475 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 45.306 4.95e-91 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu06g02587 HLH 7.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02587 - - ahf:112697399 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02587 06 101325501 101332529 Adu06g02587 06 101325501 101332529 ECH