Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02586 ATGGCTCTTACACTTGAGTGTGCCCTCTCTCACATACTCAGTTTCCTAGTGTTCCTGTTAATATTCCTAGTGAACCCTTCCTTCTGCTTCAACCCCAAAAAGCTTGTGAATGCTTCATTCTCATACTCCCCATCTGCTTCAGATTGGTCACCGGCACTTGCCACTTGGTATGGACCTGCTAACGGTGATGGAAGTGAAGGTAATAATAACGTCATCGCCATGCAATTTTTCCTTCATGATACagatttacaatttttttttattagaGTGAGATGCACTGGGAATTCAGCATGCTCGGGGGAGGCTGTGAAGGTAGTGATGACAGATGAGTGCGATGGGTGTGGTTCAGATGCCGAATACCATTTTGATTTGAGTGGCACTGCTTTTGGTGCCATGGCTCTCTCCGGTCAAGATGGCACCTTACGCAATGCTGGCAAAATCAACATTCAGCATCGAAGAGTTGAATGCAACTACCCTGGTGTGTCAATTGCATTCCACGTGGATGCTGGATCGAACCAAGAATACTTCGCTGCCGTGATTGAATACGAGGATGGAGATGGTGACCTTTCAAAAGTTGAACTCAAAGAAGCACTTGACTCAGCCTCATGGTACACCATGGATCAATCATGGGGTGCTGTTTGGAAACTTGACAAAGGGTCACCACTCAGAGCACCTTTCTCTCTTCGGCTAACCACACTTGAGTCTGGTAACTCTATTGTGGCCAACAATGTCATACCTGCTGCCTGGGTTCCCGGACACACCTACAGATCCATTGTTAATTTTCAAACCTAG 792 0.4558 MALTLECALSHILSFLVFLLIFLVNPSFCFNPKKLVNASFSYSPSASDWSPALATWYGPANGDGSEGNNNVIAMQFFLHDTDLQFFFIRVRCTGNSACSGEAVKVVMTDECDGCGSDAEYHFDLSGTAFGAMALSGQDGTLRNAGKINIQHRRVECNYPGVSIAFHVDAGSNQEYFAAVIEYEDGDGDLSKVELKEALDSASWYTMDQSWGAVWKLDKGSPLRAPFSLRLTTLESGNSIVANNVIPAAWVPGHTYRSIVNFQT 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02586 263 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Adu06g02586 263 PRINTS Expansin/Lol pI family signature 243 257 IPR007118 GO:0005576
Adu06g02586 263 PRINTS Expansin/Lol pI family signature 48 63 IPR007118 GO:0005576
Adu06g02586 263 SUPERFAMILY PHL pollen allergen 163 257 IPR036749 -
Adu06g02586 263 Pfam Expansin C-terminal domain 163 246 IPR007117 -
Adu06g02586 263 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 88 161 IPR007112 -
Adu06g02586 263 PANTHER EXPANSIN-B2-RELATED 89 262 - -
Adu06g02586 263 PANTHER EXPANSIN-B2-RELATED 8 68 - -
Adu06g02586 263 PANTHER EXPANSIN-B3 89 262 - -
Adu06g02586 263 SUPERFAMILY Barwin-like endoglucanases 38 160 IPR036908 -
Adu06g02586 263 Pfam Lytic transglycolase 87 150 IPR009009 -
Adu06g02586 263 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 174 257 IPR007117 -
Adu06g02586 263 Gene3D - 158 262 IPR036749 -
Adu06g02586 263 Gene3D - 45 154 IPR036908 -
Adu06g02586 263 PRINTS Major pollen allergen Lol pI signature 92 102 IPR005795 GO:0005576|GO:0019953
Adu06g02586 263 PRINTS Major pollen allergen Lol pI signature 133 148 IPR005795 GO:0005576|GO:0019953
Adu06g02586 263 PRINTS Major pollen allergen Lol pI signature 212 229 IPR005795 GO:0005576|GO:0019953
Adu06g02586 263 PRINTS Major pollen allergen Lol pI signature 165 180 IPR005795 GO:0005576|GO:0019953
Adu06g02586 263 PRINTS Major pollen allergen Lol pI signature 181 196 IPR005795 GO:0005576|GO:0019953
Adu06g02586 263 PANTHER EXPANSIN-B3 8 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02586 Adu-Chr6 101277576 101280648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02586 25 261 Expansin Gene Family AT1G65680 51.587 4.33e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02586 - - gmx:548090 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02586 06 101277576 101280648 Adu06g02586 06 101277576 101280648 ECH
Adu06g02586 06 101277576 101280648 Adu02g02158 02 85514414 85516811 PCT