Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02578 ATGGCACGGATTGCCAGGTCCTCTGCGCCGCGCCTGCTCTACACCTTCTTCTCCTCCTCCGTGCCCCCGGCATCCCCATCGCCATCTCCGTCTCCGGCGTCGTCCCTCCTTGCCGGCGCATTCCACCTGCGGCACTTCTCGTCGGGCAACGCTGCTCGAGCGAGGGCGGCGGCGGCGGACAAGGAGCCATGGTGGAAGGAGTCCATGGAGCGGTTACGCAACATCGGGATCTCTGCTCACATCGACTCCGGCAAGACAACTTTGACGGAGCGAGTGCTTTTCTACACTGGTCGTATCCACGAGATCCACGAGGTTCGGGGAAGAGACGGCGTCGGCGCCAAGATGGATTCCATGGACTTGGAGAGGGAGAAAGGTATCACTATCCAGTCTGCTGCTACTTACTGCTCTTGGAAAGACTATAAGATTAACATAATTGACACACCTGGTCACGTTGATTTCACCATTGAAGTTGAGAGGGCTTTGCGTGTCCTTGATGGTGCTATTCTTGTACTTTGTAGTGTTGGTGGTGTGCAAAGTCAGTCCATCACAGTAGATCGACAAATGAGAAGATACGAGGTTCCAAGACTTGCATTTATTAACAAGCTTGATCGGATGGGAGCAGATCCATGGAAAGTTTTAAATCAGGCACGATCTAAGCTTCGGCATCATAGTGCTGCAATGCAAGTTCCGATAGGCTTGGAGGATGATTTTGAGGGACTTGTTGATCTTGTGCAGTTAAAAGCATACTATTTTCGGGGTTCTAATGGTGAAAAAGTTGTCACTGAAGAGGTGCCTGCAGATATGGAAGCCTTGGTAGCAGAAAAAAGGCGTGAGCTCATAGAAGCTGTGTCAGAAGTTGATGATCAACTTGCTGAAGCTTTTCTTGGTGATGAGCCCATATCACCTGCTGACCTTCAGGAAGCAATTCGTAGGGCCACCATAGCACGGAAGTTTGTACCTGTGTTCATGGGTAGTGCTTTTAAAAATAAGGGAGTACAGCCACTTCTGGATGGTGTACTTAATTATTTGCCATGTCCAATTGAAGTTAGTAGTTATGCCCTTGACCAAACAAAGAATGAGGAAAAGGTTGAGTTGACTGGAAGTCCTGATGGGCCACTTGTAGCGTTGGCATTTAAGTTGGAGGAAGGGCGGTTTGGCCAGTTGACATATTTAAGAATTTACGAGGGTGTGATCCGCAAGGGCGAGTTTATTATTAATGTAAACACCGGCAAGAAGATCAAGGTTCCTCGCTTAGTTAGGATGCATTCTGATGAGATGGAGGACATTCAAGAGGCTCATGCAGGGCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCAGGAGATACGTTTACCGATGGATCAGTTAAATACACAATGACTTCCATGAATGTTCCTGAACCTGTAATGTCATTAGCTGTACAGCCAGTTTCAAAAGATTCTGGAGGTCAAGTAAGTACTTTGAATCGCTTCCAGAAAGAGGATCCTACATTCCGTGTTGGTTTAGACCCAGAGAGTGGGCAGACTATCATTTCTGGCATGGGAGAACTACATTTAGATATTTATGTTGAACGTATTCGGAGAGAGTATAAGGTTGATGCAACTGTTGGAAAGCCCCGTGTAAACTTCAGAGAAACTGTTACACAACGTGCTGATTTTGATTATTTACACAAGAAGCAATCTGGAGGGCAAGGTCAATATGGACGGGTAATCGGGTATATTGAACCACTTCCGGCAGGATCACCAACTAAATTCGAATTTGAAAACCTCCTTGTTGGGCAAGCTATTCCATCAGGTTTTATCCCTGCAATTGAAAAAGGTTTTAAGGAAGCTGCCAACTCGGGGGCTTTAATTGGACATCCTGTCGAAAATCTTAGAGTTGTCTTGACAGATGGTGCTGCTCATGCTGTTGATTCTAGTGAACTTGCATTTAAGTTGGCTTCTATCTATGCTTTCAGACAGTGCTATACAGCTTCCAGGCCAGTTATATTAGAACCTGTTATGCTTGTTGAGCTGAAAGTACCAACAGAATTCCAAGGAGCCGTTGCTGGTGACATTAACAAGAGAAAAGGTGTTATTGTTGGCAATGATCAGGAAGGAGATGACTCTATCATCACTGCCCATGTCCCTCTTAACAATATGTTTGGGTATTCTACAGCTCTTCGTTCAATGACCCAGGGGAAAGGTGAGTTCACAATGGAATACAAGGAACATTCACCTGTATCTCATGAGGTACAGACGCAATTAATAAACTCCTACAAGGGCAAGGCAGCTGAATGA 2280 0.4596 MARIARSSAPRLLYTFFSSSVPPASPSPSPSPASSLLAGAFHLRHFSSGNAARARAAAADKEPWWKESMERLRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAMQVPIGLEDDFEGLVDLVQLKAYYFRGSNGEKVVTEEVPADMEALVAEKRRELIEAVSEVDDQLAEAFLGDEPISPADLQEAIRRATIARKFVPVFMGSAFKNKGVQPLLDGVLNYLPCPIEVSSYALDQTKNEEKVELTGSPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGEFIINVNTGKKIKVPRLVRMHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSGGQVSTLNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDATVGKPRVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYIEPLPAGSPTKFEFENLLVGQAIPSGFIPAIEKGFKEAANSGALIGHPVENLRVVLTDGAAHAVDSSELAFKLASIYAFRQCYTASRPVILEPVMLVELKVPTEFQGAVAGDINKRKGVIVGNDQEGDDSIITAHVPLNNMFGYSTALRSMTQGKGEFTMEYKEHSPVSHEVQTQLINSYKGKAAE 759
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02578 759 CDD mtEFG1_C 665 742 IPR035649 -
Adu06g02578 759 Gene3D - 59 349 IPR027417 -
Adu06g02578 759 Pfam Elongation factor G, domain IV 539 658 IPR005517 GO:0005525
Adu06g02578 759 CDD EFG_III 466 540 IPR009022 -
Adu06g02578 759 TIGRFAM EF-G: translation elongation factor G 68 754 IPR004540 GO:0003746|GO:0005525|GO:0006414
Adu06g02578 759 TIGRFAM small_GTP: small GTP-binding protein domain 72 244 IPR005225 GO:0005525
Adu06g02578 759 Gene3D - 545 750 IPR014721 -
Adu06g02578 759 Pfam Elongation factor Tu GTP binding domain 71 344 IPR000795 GO:0003924|GO:0005525
Adu06g02578 759 Pfam Elongation factor G C-terminus 663 748 IPR000640 -
Adu06g02578 759 Hamap Elongation factor G [fusA]. 68 753 IPR004540 GO:0003746|GO:0005525|GO:0006414
Adu06g02578 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 344 IPR027417 -
Adu06g02578 759 Gene3D Translation factors 354 471 - -
Adu06g02578 759 SUPERFAMILY Translation proteins 311 463 IPR009000 -
Adu06g02578 759 Pfam Elongation factor Tu domain 2 386 452 IPR004161 GO:0005525
Adu06g02578 759 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 758 IPR045044 -
Adu06g02578 759 CDD EF-G 74 346 - -
Adu06g02578 759 SUPERFAMILY EF-G C-terminal domain-like 662 754 IPR035647 -
Adu06g02578 759 Gene3D Elongation Factor G (Translational Gtpase), domain 3 472 544 - -
Adu06g02578 759 SMART EFG_C_a 662 749 IPR000640 -
Adu06g02578 759 SMART EFG_IV_2 540 660 IPR005517 GO:0005525
Adu06g02578 759 PRINTS GTP-binding elongation factor signature 143 153 IPR000795 GO:0003924|GO:0005525
Adu06g02578 759 PRINTS GTP-binding elongation factor signature 123 131 IPR000795 GO:0003924|GO:0005525
Adu06g02578 759 PRINTS GTP-binding elongation factor signature 74 87 IPR000795 GO:0003924|GO:0005525
Adu06g02578 759 PRINTS GTP-binding elongation factor signature 159 170 IPR000795 GO:0003924|GO:0005525
Adu06g02578 759 PRINTS GTP-binding elongation factor signature 195 204 IPR000795 GO:0003924|GO:0005525
Adu06g02578 759 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 758 - -
Adu06g02578 759 CDD EFG_mtEFG1_IV 543 656 IPR005517 GO:0005525
Adu06g02578 759 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 70 347 IPR000795 GO:0003924|GO:0005525
Adu06g02578 759 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 116 131 IPR031157 -
Adu06g02578 759 Pfam Elongation Factor G, domain III 465 538 IPR041095 -
Adu06g02578 759 Gene3D - 666 736 - -
Adu06g02578 759 CDD mtEFG1_II_like 373 453 - -
Adu06g02578 759 SUPERFAMILY EF-G C-terminal domain-like 463 539 IPR035647 -
Adu06g02578 759 SUPERFAMILY Ribosomal protein S5 domain 2-like 539 661 IPR020568 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu06g02578 Adu-Chr6 101161033 101171849 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02578 388 547 Eukaryotic Initiation Factors Gene Family AT3G22980 24.719 5.38e-07 51.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02578 K02355 - gmx:100783315 1367.44
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02578 06 101161033 101171849 Adu06g02578 06 101161033 101171849 ECH