Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g02578 | ATGGCACGGATTGCCAGGTCCTCTGCGCCGCGCCTGCTCTACACCTTCTTCTCCTCCTCCGTGCCCCCGGCATCCCCATCGCCATCTCCGTCTCCGGCGTCGTCCCTCCTTGCCGGCGCATTCCACCTGCGGCACTTCTCGTCGGGCAACGCTGCTCGAGCGAGGGCGGCGGCGGCGGACAAGGAGCCATGGTGGAAGGAGTCCATGGAGCGGTTACGCAACATCGGGATCTCTGCTCACATCGACTCCGGCAAGACAACTTTGACGGAGCGAGTGCTTTTCTACACTGGTCGTATCCACGAGATCCACGAGGTTCGGGGAAGAGACGGCGTCGGCGCCAAGATGGATTCCATGGACTTGGAGAGGGAGAAAGGTATCACTATCCAGTCTGCTGCTACTTACTGCTCTTGGAAAGACTATAAGATTAACATAATTGACACACCTGGTCACGTTGATTTCACCATTGAAGTTGAGAGGGCTTTGCGTGTCCTTGATGGTGCTATTCTTGTACTTTGTAGTGTTGGTGGTGTGCAAAGTCAGTCCATCACAGTAGATCGACAAATGAGAAGATACGAGGTTCCAAGACTTGCATTTATTAACAAGCTTGATCGGATGGGAGCAGATCCATGGAAAGTTTTAAATCAGGCACGATCTAAGCTTCGGCATCATAGTGCTGCAATGCAAGTTCCGATAGGCTTGGAGGATGATTTTGAGGGACTTGTTGATCTTGTGCAGTTAAAAGCATACTATTTTCGGGGTTCTAATGGTGAAAAAGTTGTCACTGAAGAGGTGCCTGCAGATATGGAAGCCTTGGTAGCAGAAAAAAGGCGTGAGCTCATAGAAGCTGTGTCAGAAGTTGATGATCAACTTGCTGAAGCTTTTCTTGGTGATGAGCCCATATCACCTGCTGACCTTCAGGAAGCAATTCGTAGGGCCACCATAGCACGGAAGTTTGTACCTGTGTTCATGGGTAGTGCTTTTAAAAATAAGGGAGTACAGCCACTTCTGGATGGTGTACTTAATTATTTGCCATGTCCAATTGAAGTTAGTAGTTATGCCCTTGACCAAACAAAGAATGAGGAAAAGGTTGAGTTGACTGGAAGTCCTGATGGGCCACTTGTAGCGTTGGCATTTAAGTTGGAGGAAGGGCGGTTTGGCCAGTTGACATATTTAAGAATTTACGAGGGTGTGATCCGCAAGGGCGAGTTTATTATTAATGTAAACACCGGCAAGAAGATCAAGGTTCCTCGCTTAGTTAGGATGCATTCTGATGAGATGGAGGACATTCAAGAGGCTCATGCAGGGCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCAGGAGATACGTTTACCGATGGATCAGTTAAATACACAATGACTTCCATGAATGTTCCTGAACCTGTAATGTCATTAGCTGTACAGCCAGTTTCAAAAGATTCTGGAGGTCAAGTAAGTACTTTGAATCGCTTCCAGAAAGAGGATCCTACATTCCGTGTTGGTTTAGACCCAGAGAGTGGGCAGACTATCATTTCTGGCATGGGAGAACTACATTTAGATATTTATGTTGAACGTATTCGGAGAGAGTATAAGGTTGATGCAACTGTTGGAAAGCCCCGTGTAAACTTCAGAGAAACTGTTACACAACGTGCTGATTTTGATTATTTACACAAGAAGCAATCTGGAGGGCAAGGTCAATATGGACGGGTAATCGGGTATATTGAACCACTTCCGGCAGGATCACCAACTAAATTCGAATTTGAAAACCTCCTTGTTGGGCAAGCTATTCCATCAGGTTTTATCCCTGCAATTGAAAAAGGTTTTAAGGAAGCTGCCAACTCGGGGGCTTTAATTGGACATCCTGTCGAAAATCTTAGAGTTGTCTTGACAGATGGTGCTGCTCATGCTGTTGATTCTAGTGAACTTGCATTTAAGTTGGCTTCTATCTATGCTTTCAGACAGTGCTATACAGCTTCCAGGCCAGTTATATTAGAACCTGTTATGCTTGTTGAGCTGAAAGTACCAACAGAATTCCAAGGAGCCGTTGCTGGTGACATTAACAAGAGAAAAGGTGTTATTGTTGGCAATGATCAGGAAGGAGATGACTCTATCATCACTGCCCATGTCCCTCTTAACAATATGTTTGGGTATTCTACAGCTCTTCGTTCAATGACCCAGGGGAAAGGTGAGTTCACAATGGAATACAAGGAACATTCACCTGTATCTCATGAGGTACAGACGCAATTAATAAACTCCTACAAGGGCAAGGCAGCTGAATGA | 2280 | 0.4596 | MARIARSSAPRLLYTFFSSSVPPASPSPSPSPASSLLAGAFHLRHFSSGNAARARAAAADKEPWWKESMERLRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAMQVPIGLEDDFEGLVDLVQLKAYYFRGSNGEKVVTEEVPADMEALVAEKRRELIEAVSEVDDQLAEAFLGDEPISPADLQEAIRRATIARKFVPVFMGSAFKNKGVQPLLDGVLNYLPCPIEVSSYALDQTKNEEKVELTGSPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGEFIINVNTGKKIKVPRLVRMHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSGGQVSTLNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDATVGKPRVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYIEPLPAGSPTKFEFENLLVGQAIPSGFIPAIEKGFKEAANSGALIGHPVENLRVVLTDGAAHAVDSSELAFKLASIYAFRQCYTASRPVILEPVMLVELKVPTEFQGAVAGDINKRKGVIVGNDQEGDDSIITAHVPLNNMFGYSTALRSMTQGKGEFTMEYKEHSPVSHEVQTQLINSYKGKAAE | 759 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g02578 | 759 | CDD | mtEFG1_C | 665 | 742 | IPR035649 | - | |
Adu06g02578 | 759 | Gene3D | - | 59 | 349 | IPR027417 | - | |
Adu06g02578 | 759 | Pfam | Elongation factor G, domain IV | 539 | 658 | IPR005517 | GO:0005525 | |
Adu06g02578 | 759 | CDD | EFG_III | 466 | 540 | IPR009022 | - | |
Adu06g02578 | 759 | TIGRFAM | EF-G: translation elongation factor G | 68 | 754 | IPR004540 | GO:0003746|GO:0005525|GO:0006414 | |
Adu06g02578 | 759 | TIGRFAM | small_GTP: small GTP-binding protein domain | 72 | 244 | IPR005225 | GO:0005525 | |
Adu06g02578 | 759 | Gene3D | - | 545 | 750 | IPR014721 | - | |
Adu06g02578 | 759 | Pfam | Elongation factor Tu GTP binding domain | 71 | 344 | IPR000795 | GO:0003924|GO:0005525 | |
Adu06g02578 | 759 | Pfam | Elongation factor G C-terminus | 663 | 748 | IPR000640 | - | |
Adu06g02578 | 759 | Hamap | Elongation factor G [fusA]. | 68 | 753 | IPR004540 | GO:0003746|GO:0005525|GO:0006414 | |
Adu06g02578 | 759 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 69 | 344 | IPR027417 | - | |
Adu06g02578 | 759 | Gene3D | Translation factors | 354 | 471 | - | - | |
Adu06g02578 | 759 | SUPERFAMILY | Translation proteins | 311 | 463 | IPR009000 | - | |
Adu06g02578 | 759 | Pfam | Elongation factor Tu domain 2 | 386 | 452 | IPR004161 | GO:0005525 | |
Adu06g02578 | 759 | PANTHER | ELONGATION FACTOR G, MITOCHONDRIAL | 1 | 758 | IPR045044 | - | |
Adu06g02578 | 759 | CDD | EF-G | 74 | 346 | - | - | |
Adu06g02578 | 759 | SUPERFAMILY | EF-G C-terminal domain-like | 662 | 754 | IPR035647 | - | |
Adu06g02578 | 759 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 472 | 544 | - | - | |
Adu06g02578 | 759 | SMART | EFG_C_a | 662 | 749 | IPR000640 | - | |
Adu06g02578 | 759 | SMART | EFG_IV_2 | 540 | 660 | IPR005517 | GO:0005525 | |
Adu06g02578 | 759 | PRINTS | GTP-binding elongation factor signature | 143 | 153 | IPR000795 | GO:0003924|GO:0005525 | |
Adu06g02578 | 759 | PRINTS | GTP-binding elongation factor signature | 123 | 131 | IPR000795 | GO:0003924|GO:0005525 | |
Adu06g02578 | 759 | PRINTS | GTP-binding elongation factor signature | 74 | 87 | IPR000795 | GO:0003924|GO:0005525 | |
Adu06g02578 | 759 | PRINTS | GTP-binding elongation factor signature | 159 | 170 | IPR000795 | GO:0003924|GO:0005525 | |
Adu06g02578 | 759 | PRINTS | GTP-binding elongation factor signature | 195 | 204 | IPR000795 | GO:0003924|GO:0005525 | |
Adu06g02578 | 759 | PANTHER | ELONGATION FACTOR G, MITOCHONDRIAL | 1 | 758 | - | - | |
Adu06g02578 | 759 | CDD | EFG_mtEFG1_IV | 543 | 656 | IPR005517 | GO:0005525 | |
Adu06g02578 | 759 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 70 | 347 | IPR000795 | GO:0003924|GO:0005525 | |
Adu06g02578 | 759 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 116 | 131 | IPR031157 | - | |
Adu06g02578 | 759 | Pfam | Elongation Factor G, domain III | 465 | 538 | IPR041095 | - | |
Adu06g02578 | 759 | Gene3D | - | 666 | 736 | - | - | |
Adu06g02578 | 759 | CDD | mtEFG1_II_like | 373 | 453 | - | - | |
Adu06g02578 | 759 | SUPERFAMILY | EF-G C-terminal domain-like | 463 | 539 | IPR035647 | - | |
Adu06g02578 | 759 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 539 | 661 | IPR020568 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g02578 | Adu-Chr6 | 101161033 | 101171849 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g02578 | 388 | 547 | Eukaryotic Initiation Factors Gene Family | AT3G22980 | 24.719 | 5.38e-07 | 51.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g02578 | K02355 | - | gmx:100783315 | 1367.44 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu06g02578 | 06 | 101161033 | 101171849 | Adu06g02578 | 06 | 101161033 | 101171849 | ECH |