Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02569 ATGGAAAGTGATGATACTGAAGAAAAATTAGTCTCCACCACTTCAAACTCCTCAAATTCAAGCACCATTAAAGAAAGAATGTCATCAAGAAGAGCATGTCAAATGTCCAAAAACGGCAACGAGTGCAAGAAAATGGAGAACAACAATGGCGACTACTATGCAGGGATGCATCACCCAACATACAGAGGTGTGAGAATGAGGGCATGGGGTAAGTGGGTGTCTGAGATCCGGGAGCCAAGAAAGAAATCAAGAATTTGGCTGGGAACATATAGAACCGCTGAAATGGCGGCAAAAGCGCATGACGTGGCGGCTTTAGCCATCAAAGGCCCTTCGGCTTACCTCAATTTCCCTAAAATGGCTCGGCGTTACCCAAGGCCAGTCAGTACATCTCCTAAGGACATTCAAGCTGCGGCCTCCAAGGCGGCAGCCGTGGAGAACAATACTGAAGCTGATGCTGAAGAAGAAGAACAAAATCTTGGCCTAATAATGGAATCTTCAACTTCCACTAATAATAATAATGAGCAAGAATCTTCAAGTATGGATGATGATGATGATGGCGCATTGTTTGACCTGCTACCGGATCTTTTCTCCGACGATGGAAAGAGCAGTGCATCTTCTTCCTCTTATTCTCCTTCTTGGCATCTACTATTTGCAGTTGATTATGGATTCAGGCTTGAGGAGCATTTTTTGTGGGAGAATTACTAG 705 0.444 MESDDTEEKLVSTTSNSSNSSTIKERMSSRRACQMSKNGNECKKMENNNGDYYAGMHHPTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYRTAEMAAKAHDVAALAIKGPSAYLNFPKMARRYPRPVSTSPKDIQAAASKAAAVENNTEADAEEEEQNLGLIMESSTSTNNNNEQESSSMDDDDDGALFDLLPDLFSDDGKSSASSSSYSPSWHLLFAVDYGFRLEEHFLWENY 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02569 234 MobiDBLite consensus disorder prediction 10 41 - -
Adu06g02569 234 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Adu06g02569 234 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Adu06g02569 234 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Adu06g02569 234 MobiDBLite consensus disorder prediction 1 41 - -
Adu06g02569 234 PANTHER ETHYLENE RESPONSE FACTOR 12 234 - -
Adu06g02569 234 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Adu06g02569 234 SUPERFAMILY DNA-binding domain 60 117 IPR016177 GO:0003677
Adu06g02569 234 CDD AP2 61 117 IPR001471 GO:0003700|GO:0006355
Adu06g02569 234 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 234 - -
Adu06g02569 234 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Adu06g02569 234 Gene3D AP2/ERF domain 60 119 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02569 Adu-Chr6 100942106 100942999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02569 43 230 AP2-EREBP Transcription Factor Family AT2G44940 50.704 3.27e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu06g02569 AP2 9.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02569 - - gmx:100801129 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02569 06 100942106 100942999 Adu06g02569 06 100942106 100942999 ECH