Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02562 ATGCTGCCGGCAAGGAAGCGGCGAGGGCGACGGCCACGGACGACACAAGTTGTTAACTTTGGGACGCCGGAAAATGAAGTTCCGAGTGATAATAATGTTGACCTTGACAAAGACGCCAAAGACGATGATGGAGCTACAAATTCCTCTCTTGTTCAGAACTCCAAGGGAATGAGGCAGGACAGAAAGCGAAAGATGGCGAAGATTTCTAGTAACATCGGAACTAGCAGCAGAAGCAGGGCTGAGAGTGAAGAGGAGGAAAATGGTTATTCGACGGCGACGGAAAGTGAACTTCCGAGTGATAATGTTGAGCTTGGGTTGGATAAAGATTCTCAAAAGGACGACGCCAACGGCAGGAGGTTCCTACTTCGGAAGCATCAACAGGAGACACCCAAAGTCATTAGGCGAGGCCCTAAATTTATTCAAGAGGAGAGCTTAATGTATCCTGAATTAAAGCCGGAAGATGCAGTGTTATGTCCGGTTTGCCGTGGTAATTGCAACTGCAGAGCATGCTTGCGATCTACAGCATTAATTAAGGCAATGAGGCATCATGTGCCAAGGAACGAACAGGAGAGATTTGAGCATTCTAAGTATTTGCTAAAACGGCTTCTTCCTTATTTAAGACAGTTGGATAAAGAACAAATGATTGAGAAGGATATAGAAGCTAAGAGGAAAGGGCTTTCACTCCCAAAGCTAAATATTGAAAAGTCAGAATACCGTCAAGATGAACGTGTCCACTGTGATAACTGCAAGACGTCAATATTTGACTACCACAGATTCTGTAGAAAATGTTCTTTTCACCTTTGTCTTATCTGTTGCTATGAGCTTCGCAATGGAGAGCTACTAGGTGGTGCAGATCCAGATGAGCTTGGATTTGTCAACTGGGGTATTGATTATCAGCATGGTTGTGATATAAGTAGAGACAAGTCGAATTCAGCACATGAGGATGCTAAGCCTGACTCTAAGAAGAATTTAGCGCATTCTGATGCTAAGCCTGATGTTCGTGGATGGTCAAGATCGGGGTGGCATGCAAAGAGCGATGGCCGCATTCCTTGCCCAAAGAATACGTGTCGCAACAGGTTTCTTGAACTGAGAAGTGTACTTGGTCCAAATTTTATCTCAGAGTTAGTACACAAAGCAGAAGAAGCAGAAGCACATAAGCTTCACACTGCAGTTGAGAATCCTGTTAGCTGGTGTTCATGTTTGAGGCTCAGCAGAAACACAGATTGTAGAAGCAATAATAATACACTGAAGTCAGCTTCTCGTGAAAATTCTATTGACAACTTTTTGTACCATCCTCGGGCTATAAGTCAAAAACCTGAAGAGTTGAAACATTTTCAATGTCATTGGAGTAGAGGCGAGCCTGTTATTGTAAGCAATGTGCTTGAACATTCATCTGGTTTAAGCTGGGAACCACGAGTCATGTGGCGTGCATTCCGATCGTTTAAGGCCAACGGTAATCAACATTTGGATATGAAGGCATTTGACTGCCTAGATTGGGCACAGGGAGATATTAATATCCATCAATTCTTTTGTGGGTACGAAATTGGTCGTTGGGATAGGTGTGGTTGGCCTCAGATGCTGAGATTAAATGATTGGCCTCCTGATTTCACGGAACGTGCACCACGTCACTATGCAGAATTTATGTCTTTATTGCCCTTTGGGGAATATACACATCCTTTTGGAGGTGTTCTTAATCTTGCTTCTAAAGTACATGGGACTGGTTCAACACTTCACATGGAGCCAAAAGAATATATTGCATATGGATTTCCTCAAGAGCTTGGACGTGGTGATTCTGTGGTTAAACTCCACTATGATATTTCTGATACAGTTAATATTTTAACTCATACTGCTGGAAAAGTGAGGTTGACATCTGACCAACTTAGAACGATTGAGCATTTGAAACGGAAGCACCATGACCAAGACAAGAGAGAGCTCCTTGTAACTTATCAGGAAGAAAGCAATATATTAGCTGGAGGGGATGCTTCTGATGGTGTCCTTTGGGATGTTTTCCGGAGACAGGATATTCCTGTGTTAAAGGAATATCTGAAAAAGCATTTCAAGGAGTTCAGGCATAACTATTGCTGTCCCTTAGATAAGGTTATTCACCCCATTCATGATCAAACGATCTATCTGACTGTGGGACATAAGAGGAAGCTAAAGGAGGAGTATGGAATTGAGCCCTGGACTTTCATTCAGAAGTTAGGAGATGCTGTCTTTATTCCAGCGGGATGTCCATACCAAGTTAGAAATCTGAAGACATGCATCAATGTTGCGCTTAGTTTTGTGTCTCCTGAAAGTGTTGGCGAGTGTTTTCGTTTGGCAGAGGAAATCCGCACACTTCCGATAAATCATAGGTCGAGCGAGGACAAGTTGGAGGTGAAGAAAATGACAATATTTTCTATAAACAATGTCCTTGAAAACTTGTCAAGAGCAAGCTTGAATGAAAATCTGAAACCTGAAAGGAATATCCAAGAAAAGCAGCCAACCGGAGAAAAGGATAAATGGGACGAGTATACGACCGGAGTTTTCTTGGACGTATGTGTTGAGGAAATAGCTTCAGGGAATAGAGCTGACGCTGACTTCAATGAAGAGGGATGGATTAATGTGATTGCTAAGTTCAATGGAAAAACAGGTCGTAACTATGACTGCAGGCAATTGAAAGATAAATGGGACATTTTGAAAGGTGACTTTAATTTATGGGAAAAGCTTCTTGAAATTGGTGTGGGATGGGATCCTGTTAAAAAAACCATAAAAGCATCTCAAGAGTTCTGGGTAGCTAGAAGAAAGGAGAACCCAGAATTTCTGAAATTTAGGTTTCAATGTCCTTCACACTTGGATAAGTTGGAAGCATGTTTTAAAGATATGAAGGCTATAGGTGATGTAGCTTTGAAAACACATGCAGATCCATCATCAGCTGAGGTGAGGGTATGTGGGAAAGAAAATGAGGATAATCATGAATTAAGGGCTTTTGGTGAGGGTGTTAGGGACAGTGATAGTGTTGCTTATGAAGAACCTCATACTTCATATAGTGTGGGCCACACTACTTCAAATGATAATCCAAATAAAAGGCAGATACAGCTAAATGATAAAAAACAATTTGGTAAAGTCAATAAGCTTCAACATTCTGTTAGCGTGCCTTTGGAGGAAGAGGAACATAGCATCCCTCCGGAAGTGACACATAGAAGAGCTACTCAAGAGAATCAGCCCATTCCAGACAATGATAAATGGGATGATTTCACAATAGGAGTTTTCTTGGAAGTATGTGTTCAGGAAATAGCTGCTGGGAATAGGCCTCATGATGACTTTAACAAAGAGGGATGGAACAATGTGGTTGCCAAGTTTAATGGAAAAACTGGTCAAAATTATGATCATAGGCAATTGAAAAAGGAACTGGACAATCTAAAAAATGATTTTACTTTATGGGCAAAGCTTGTTGAAAATCAAACTGGTTTAGGATGGGATCCTATTAAAAAAACTGTCAAAGCACCTCCCAAATTTTGGGAATCCAGAAAAAAGGAGAACCCTGCATTTCTAAAGTTTGAGCATCAAGGTCCTCCACACTTAGATAAGTTGGAAGCTTGCTTTGAAGATGCTAAAGGTACAAGTTATGTAGCTATATATGCAGATCCATCACCAAATGGGGTGGGGTTTTATGGTGAAGAGAATGAGGATAATCTTGAATTAAGGGCTTCCAATGAGGATGATGGGGACAGTGGTGATGATGTTGCTATTGAAGAAACTCATCATACACAGAATGTGCAGCATAGGGAATATAATGAGAATAATCCTGAATTAAGGGCCTCTGAGGAGGGTTTCAGTGATGTTGTTGATGTTGCTATTGAAGAAACTCATCATCATATGCATAATGTAGAGCCTAGGAAAGAGAATGAGAATAATCCCGAACTAAGGGCTTCCGATGAGGGTGTCAGTAGCGCTGATGTTACCATTAGGGAAGAGAATGAGATTAATCCTGAATTAAGGGCTTTTGATGAGGGTGTCTCCGGCAGTGATGTTGCTATTGACAAAACTCATGATACGCATAATGTAGAACTTAGTGAAGAGAATGAGGATAATCCGGAATTAAGGGCTTCCCATGAAGGGGATGGTGATGTTGTTGGCATTGCTAATGTGGAGCCTCTTGGAGAGAATGAGGATAACCTTGAATTAAGGGCTTCTGATGAGGGTGTTGGGGATGGTGATGGTGTTGCTAATAAAGAAACTTATCATTCACATAATGCAGAGCCTGGTCCTTCAAATAGTGTTCCGAAGAAAAGGAAGAGACTGAGGAAAGCTAAGAAGCATTCTGGTAAAGCAGTTAAGGCAAAAGCAAATAATACTGCCACTGGTTTTGAATGTAATTTGGATTTGGATAGCTGTCTGACGTTACTTGGTAGCGTGCCTGGTCTCGAGAAAGGAAGTACTTTGTACTTCATTGCCTGCAGAGTTCTTACAAAGATTGTTAACAGGCAAACTTTTGTGCATTTGATGCGAGATGATCCTAAGTTGGCATTTGGTTGGCTCAACACTTTTACATTGGAGGACCTAAAGAATTTGACTGGCTGA 4563 0.4146 MLPARKRRGRRPRTTQVVNFGTPENEVPSDNNVDLDKDAKDDDGATNSSLVQNSKGMRQDRKRKMAKISSNIGTSSRSRAESEEEENGYSTATESELPSDNVELGLDKDSQKDDANGRRFLLRKHQQETPKVIRRGPKFIQEESLMYPELKPEDAVLCPVCRGNCNCRACLRSTALIKAMRHHVPRNEQERFEHSKYLLKRLLPYLRQLDKEQMIEKDIEAKRKGLSLPKLNIEKSEYRQDERVHCDNCKTSIFDYHRFCRKCSFHLCLICCYELRNGELLGGADPDELGFVNWGIDYQHGCDISRDKSNSAHEDAKPDSKKNLAHSDAKPDVRGWSRSGWHAKSDGRIPCPKNTCRNRFLELRSVLGPNFISELVHKAEEAEAHKLHTAVENPVSWCSCLRLSRNTDCRSNNNTLKSASRENSIDNFLYHPRAISQKPEELKHFQCHWSRGEPVIVSNVLEHSSGLSWEPRVMWRAFRSFKANGNQHLDMKAFDCLDWAQGDINIHQFFCGYEIGRWDRCGWPQMLRLNDWPPDFTERAPRHYAEFMSLLPFGEYTHPFGGVLNLASKVHGTGSTLHMEPKEYIAYGFPQELGRGDSVVKLHYDISDTVNILTHTAGKVRLTSDQLRTIEHLKRKHHDQDKRELLVTYQEESNILAGGDASDGVLWDVFRRQDIPVLKEYLKKHFKEFRHNYCCPLDKVIHPIHDQTIYLTVGHKRKLKEEYGIEPWTFIQKLGDAVFIPAGCPYQVRNLKTCINVALSFVSPESVGECFRLAEEIRTLPINHRSSEDKLEVKKMTIFSINNVLENLSRASLNENLKPERNIQEKQPTGEKDKWDEYTTGVFLDVCVEEIASGNRADADFNEEGWINVIAKFNGKTGRNYDCRQLKDKWDILKGDFNLWEKLLEIGVGWDPVKKTIKASQEFWVARRKENPEFLKFRFQCPSHLDKLEACFKDMKAIGDVALKTHADPSSAEVRVCGKENEDNHELRAFGEGVRDSDSVAYEEPHTSYSVGHTTSNDNPNKRQIQLNDKKQFGKVNKLQHSVSVPLEEEEHSIPPEVTHRRATQENQPIPDNDKWDDFTIGVFLEVCVQEIAAGNRPHDDFNKEGWNNVVAKFNGKTGQNYDHRQLKKELDNLKNDFTLWAKLVENQTGLGWDPIKKTVKAPPKFWESRKKENPAFLKFEHQGPPHLDKLEACFEDAKGTSYVAIYADPSPNGVGFYGEENEDNLELRASNEDDGDSGDDVAIEETHHTQNVQHREYNENNPELRASEEGFSDVVDVAIEETHHHMHNVEPRKENENNPELRASDEGVSSADVTIREENEINPELRAFDEGVSGSDVAIDKTHDTHNVELSEENEDNPELRASHEGDGDVVGIANVEPLGENEDNLELRASDEGVGDGDGVANKETYHSHNAEPGPSNSVPKKRKRLRKAKKHSGKAVKAKANNTATGFECNLDLDSCLTLLGSVPGLEKGSTLYFIACRVLTKIVNRQTFVHLMRDDPKLAFGWLNTFTLEDLKNLTG 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02562 1520 MobiDBLite consensus disorder prediction 1347 1368 - -
Adu06g02562 1520 Pfam Myb/SANT-like DNA-binding domain 1076 1168 IPR024752 -
Adu06g02562 1520 Pfam Myb/SANT-like DNA-binding domain 834 924 IPR024752 -
Adu06g02562 1520 MobiDBLite consensus disorder prediction 1285 1302 - -
Adu06g02562 1520 Gene3D Cupin 432 787 - -
Adu06g02562 1520 MobiDBLite consensus disorder prediction 1422 1439 - -
Adu06g02562 1520 MobiDBLite consensus disorder prediction 307 341 - -
Adu06g02562 1520 MobiDBLite consensus disorder prediction 1347 1367 - -
Adu06g02562 1520 MobiDBLite consensus disorder prediction 1 114 - -
Adu06g02562 1520 SMART cupin_9 540 778 IPR003347 -
Adu06g02562 1520 MobiDBLite consensus disorder prediction 1285 1311 - -
Adu06g02562 1520 ProSiteProfiles JmjC domain profile. 529 778 IPR003347 -
Adu06g02562 1520 MobiDBLite consensus disorder prediction 15 29 - -
Adu06g02562 1520 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 52 810 IPR045109 GO:0032454|GO:0033169
Adu06g02562 1520 MobiDBLite consensus disorder prediction 1391 1442 - -
Adu06g02562 1520 Pfam JmjC domain, hydroxylase 665 761 IPR003347 -
Adu06g02562 1520 MobiDBLite consensus disorder prediction 30 44 - -
Adu06g02562 1520 SUPERFAMILY Clavaminate synthase-like 438 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02562 Adu-Chr6 100756451 100781077 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Adu06g02562 JmjC 5.4e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02562 K15601 - mnt:21406437 700.279