Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02553 ATGAGTTGCTTTCTCTACTTCAAAGACAAATCTAGGAAGTGGAAGCGTAGATCAGCACCTGAATTGAAAAAACAAGAGAAATCCAAGCTCAATGCTTTTAAAAGAGTCACCAAGTCTTCAGGATCTTCGTCCTCACCTCGTGGTATACCGGAATTGTATGAGGAGAAAGCTCATAATTTGAGGGTTTTCTCCTACGACGAGCTCCGCCAAGCCACCAATGATTTCAGTAGAGTTTTTAAGATAGGAGAAGGTGGATTTGGGAGTGTATATAAAGGTTCAATCAAACCTGTCATTGCTAATGCTGATCCTGTTTCAGTTGCCATCAAAAGGCTTAACCAGAATGGTTTGCAGGGCCATAAGCAATGGTTAGCTGAAGTTCAGTTTCTTGGCGTTGTGGAGCACCAAAATCTTGTCAAACTAATAGGGTACTGTTCTGTGGATGGAGAAAGAGGAATTCAAAGACTGCTTGTATATGAATACATGTCGAATAAAAGCTTAGAATCCCATCTTTTCAATAAAGCCTATGATCCTCTTCCTTGGAAAACAAGACTTGAGATAGCACTTGGAGCAGCTCAAGGGTTAGCATATCTGCATGAAGAATCAGAAGTTCAGGTGATATATCGGGATTTTAAATGCTCAaatatactactggatgaaaattttaggccaaaactttcagatttcggactcgcTAGGGAGGGACCGGAAGTTGGACATACTCATGTTTCAACTGCTGTGATGGGAACAAATGGTTATGCTGCTCCAGATTATATTCAGACAGGCCATCTCACTACCAAGAGCGACGTGTGGAGTTTCGGCGTGGTGCTTTACGAGTTACTTACAGGAAGGCGTTCATTGGAGCGAAGCCGGCCCAAAACTGAGCAGAAACTTTTGGAATGGGTGAAACAATACCCTGCCGAGACCAAAAGGTTTGTCCTAATAATGGATCCAAGACTTGAAGGCCAGTATTCAATTCACGGAGCGCGAAAACTTGCAAAGCTTGCAGATCATTGTTTGAGTAGAAGCGCAAAAGAACGACCGTTGATGAGTCAAGTGGTAGGGATACTGAAGCAGATAATCCAAACTTCTGATGATGAAAAATCTGCAGAGGAGAGTACTGTAGTATCAGATGATGATCTAACCAAGACTGAAGAGAAGTCGACACAATCGGCTCCCTCGGAATTATGGAGAAAGAGGATGGACCATCTTGCAAAACTTGGTGAGCATGTGGAGAGTGCTAGTAGAAGAAGATTTATGATCCTACAGAGAGGAAAAGTTCCTTAA 1284 0.4089 MSCFLYFKDKSRKWKRRSAPELKKQEKSKLNAFKRVTKSSGSSSSPRGIPELYEEKAHNLRVFSYDELRQATNDFSRVFKIGEGGFGSVYKGSIKPVIANADPVSVAIKRLNQNGLQGHKQWLAEVQFLGVVEHQNLVKLIGYCSVDGERGIQRLLVYEYMSNKSLESHLFNKAYDPLPWKTRLEIALGAAQGLAYLHEESEVQVIYRDFKCSNILLDENFRPKLSDFGLAREGPEVGHTHVSTAVMGTNGYAAPDYIQTGHLTTKSDVWSFGVVLYELLTGRRSLERSRPKTEQKLLEWVKQYPAETKRFVLIMDPRLEGQYSIHGARKLAKLADHCLSRSAKERPLMSQVVGILKQIIQTSDDEKSAEESTVVSDDDLTKTEEKSTQSAPSELWRKRMDHLAKLGEHVESASRRRFMILQRGKVP 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02553 427 Pfam Protein tyrosine and serine/threonine kinase 80 354 IPR001245 GO:0004672|GO:0006468
Adu06g02553 427 CDD STKc_IRAK 81 359 - -
Adu06g02553 427 PANTHER OS07G0495150 PROTEIN 26 415 - -
Adu06g02553 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Adu06g02553 427 Gene3D Phosphorylase Kinase; domain 1 49 160 - -
Adu06g02553 427 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02553 427 Gene3D Transferase(Phosphotransferase) domain 1 161 384 - -
Adu06g02553 427 PANTHER OS01G0588500 PROTEIN-RELATED 26 415 - -
Adu06g02553 427 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Adu06g02553 427 MobiDBLite consensus disorder prediction 367 394 - -
Adu06g02553 427 SUPERFAMILY Protein kinase-like (PK-like) 57 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02553 Adu-Chr6 100611575 100614899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02553 1 399 Glycoside Hydrolase AT3G07070 42.686 6.55e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu06g02553 PK_Tyr_Ser-Thr 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02553 - - cam:101511022 647.506