Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02547 ATGTCAATTCTCTCTCTGGTGATATCCCTCGTCAGATTGCCAACCTCTCTAATCTTCAAGGCAGTTTTGCAGATTAGCTATAACGAGTTCAGTGGCGGTGTACCTTCTGAACTAGAGAAGTTGAAGAAGCTTAGCGTTCTTTCACTGCAATATAATCAATTATACGGCGCAATTCCAGCAAGTTTGGGTGAATTGGACTCGCTAACACGATTAGATCTGAGCTTCAACCAATTTTTCGGTCCAATCCCAGTGAGTTTGGGTTATGCACCCAAACTGCAGATTCTAGATGTTCGAAACAATTCTCTCTCGGGGAATATCCCTAAAGCACTAGAAAGACTTAAAGGTGGATTCCAGTACATGAACAATCCTGGTTTATGTGGAACCGGATTCGCTGATTTATCTCCTTGTAGAGCAGTAATCAGTTCAGACCCGGTCAGACCGGAACCATATGAGCCTGGTAATCTTTCTTCAGAAGTTCTTCCAACGACGGTTCAACCAAAAGATATAAAGCCATCAAAACCATCGAATATCGGTTTGGTTTTCGCGGTAATTGCAGTTACTTTTGCTTCAACCATCTTTGGCCTGTTTATAGTGCTATGGTATCGGCATCAGAAATTGAAAATTGGAAGCACTGCTAACACTACTAGCAAGATGAAGGAAGCACGCAGGAAAATTTCATCTCCTCTGATAAGTTTGGAGTACTCCAATGGATGGGATCCATTAGCCAAAGGTCAAAGTGGTTATTCCCAGGAATTCCTAGAGAGCTTAATGTTCAACGTTGAAGATGTGGAACGCGCAACTCAGTGTTTCTCAGAGCTAAATTTGTTGGGGAAGGGTGAGTTTTCTACTATATACAGGGGAATACTGAGAGATGGATCTGTTGTGGTAGTAAAGTGCATTGCGAAAACAAGCTGCAAGCCTGATGAAACAGAGTTCTTGAAAGGGTTGAAGATATTGACTTCACTGAGGCATGAAAATCTGGTTCGGTTGAGAGGCTTTTGCTGTTCCAAGAGCCGTGGGGAGTGTTTTCTGGTCTATGATTTTGTCTCGAATGGGAGTTTGTTACGGTGCCTTGACGATGCTAAAGTTATTGAATGGTCCACAAGAGTATCCATCATCCATGGCATTGCTAAAGGTATTGCTTATCTGCATGGAAAGAAGGGAAGCAAAGGCGGTCTACTTCACCAGAATTTATCAGCCGATACAGTGCTTCTAGATGCCCGGTACAATGCGGTTCTTGCATATTCGGGATTGCACAAGCTGCTGGCAGACGACGTCGTCTTTTCCACCCTCAAAGCTAGTGCAGCCATGGGATATCTGTCTCCGGAATACACGAAAACAGGTCGTCTAACCGAGAAGAGTGATGTGTATGCATTTGGAGTGATTGTTTTCCAGCTTCTTAGTGGTAAACGTGACATCACTCAGTTAAGTCGCCAGGCGGTACAAGTTGATGACAAACTTGAAGGGAAGTTCTCGGAATCAGAGGCCGTGAAACTCTGGGGAGTTGCTCTGCTTTGCACCCACGAATCTCCTCATCTCCGACCATATATGGAAGATGTGATTCAAGAACTCTGTGACTAA 1581 0.4396 MSILSLVISLVRLPTSLIFKAVLQISYNEFSGGVPSELEKLKKLSVLSLQYNQLYGAIPASLGELDSLTRLDLSFNQFFGPIPVSLGYAPKLQILDVRNNSLSGNIPKALERLKGGFQYMNNPGLCGTGFADLSPCRAVISSDPVRPEPYEPGNLSSEVLPTTVQPKDIKPSKPSNIGLVFAVIAVTFASTIFGLFIVLWYRHQKLKIGSTANTTSKMKEARRKISSPLISLEYSNGWDPLAKGQSGYSQEFLESLMFNVEDVERATQCFSELNLLGKGEFSTIYRGILRDGSVVVVKCIAKTSCKPDETEFLKGLKILTSLRHENLVRLRGFCCSKSRGECFLVYDFVSNGSLLRCLDDAKVIEWSTRVSIIHGIAKGIAYLHGKKGSKGGLLHQNLSADTVLLDARYNAVLAYSGLHKLLADDVVFSTLKASAAMGYLSPEYTKTGRLTEKSDVYAFGVIVFQLLSGKRDITQLSRQAVQVDDKLEGKFSESEAVKLWGVALLCTHESPHLRPYMEDVIQELCD 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02547 526 Pfam Leucine Rich Repeat 91 113 IPR001611 GO:0005515
Adu06g02547 526 Gene3D Ribonuclease Inhibitor 7 138 IPR032675 -
Adu06g02547 526 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 21 524 - -
Adu06g02547 526 SUPERFAMILY Protein kinase-like (PK-like) 247 524 IPR011009 -
Adu06g02547 526 Gene3D Phosphorylase Kinase; domain 1 242 348 - -
Adu06g02547 526 ProSiteProfiles Protein kinase domain profile. 270 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02547 526 Pfam Protein tyrosine and serine/threonine kinase 274 524 IPR001245 GO:0004672|GO:0006468
Adu06g02547 526 ProSitePatterns Protein kinases ATP-binding region signature. 276 302 IPR017441 GO:0005524
Adu06g02547 526 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 21 524 - -
Adu06g02547 526 Gene3D Transferase(Phosphotransferase) domain 1 350 526 - -
Adu06g02547 526 SUPERFAMILY L domain-like 22 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02547 Adu-Chr6 100571980 100575592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02547 22 379 Miscellaneous Gene Families AT4G22730 43.445 7.61e-101 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Adu06g02547 PK_Tyr_Ser-Thr 4.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02547 - - adu:107495059 984.941