Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02546 ATGCCAGAAGGACAAGAGACACATGTAACTACTAGAGTGTTTGGTACTTTTGGCTATTTTGATCCTGAGTATACATCGTATATCTCCCATGCACTGTATTCATCCAATATAAAGCTGAGAGATGAGGGAATAGTTATTAAAGACCTCGGTTCTAAATGGGAGCCTAGTGATCAAAGTGGAAAGTGGCTAAAATTGAAGCCTGAGTACATTCAAGCTGGCGCTGATCTGGATGTGCTTATCATAGGAGGTTATTATGGCTCTGGACGACGTGGAGGGGAGCTTTGTTTGCTTAGTTCTTGGTGGGCCTTGCTGAGCGTGCATCCCCAAATACCCATCCCAAGCGGTATGAATGTTACAATATGGAACTTCTTTACAATGGCTGATTGCATTGGCATTGTTTTTCTAACTTCAAGATCTACTATAAAGAGTAATTGA 435 0.4161 MPEGQETHVTTRVFGTFGYFDPEYTSYISHALYSSNIKLRDEGIVIKDLGSKWEPSDQSGKWLKLKPEYIQAGADLDVLIIGGYYGSGRRGGELCLLSSWWALLSVHPQIPIPSGMNVTIWNFFTMADCIGIVFLTSRSTIKSN 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02546 144 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 27 71 - -
Adu06g02546 144 Gene3D DNA ligase/mRNA capping enzyme 17 68 - -
Adu06g02546 144 ProSiteProfiles ATP-dependent DNA ligase family profile. 32 94 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Adu06g02546 144 PANTHER DNA LIGASE 4 32 94 IPR029710 GO:0003677|GO:0003910|GO:0005524|GO:0006281|GO:0051103
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02546 Adu-Chr6 100522984 100524689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02546 42 92 Core DNA Replication Machinery Family AT1G08130 40.741 3.03e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02546 K10777 - cit:102608121 103.605