Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02534 ATGGGTGTCCACGGTCTCTGGGAACTACTCGCCCCCGTCGGCCGCCGCGTCTCCGTCGAGACCCTCGCCGGAAAAACCCTTGCAGTCGATGCGAGCATATGGATGGTGCAATTTATGAAGGCGATGCGCGATGAGAAGGGCGAAATGGTTCGAAACGCTCACTTGCTGGGCTTCTTTCGTCGAATTTGCAAGCTCTTGTTCCTCAGGACAAAGCCAGTCTTCGTCTTCGACGGCGGAACCCCCGCCCTAAAGCGCCGCACCGTCATCGCGCGCCGCAGGCAGCGTGAGAACGCCCAGGCCAAAGTCCGCAAGACTGCAGAGAAATTACTTCTCAATCACTTAAAGGCATTGAGGTTGAAAGAAGTTGCTGATGACATTAAGAACCAGAGGCTGCAGCAGAAGAGTGAAGCCAAGGGATGCAAAAAACCTGATCGGATGGACTTTGTCGATAGTGATCCAGGAAAAAGTAACATGAAAGAGATAAATGAAATGTCTTCAGCTAAACTTGCAGCTACAGAGGCAGGAAATTTCTTGCAAGAAGTTGTGTCAAGAAGTCGCAACCAGGAGGAACTTGATGAAATGTTGGCAGCATCTATATCTGCAGAGGAGAATGGAATACTAGCCGGGAAAGAAGTGCCATCTACTGTACCTAATACTTCAGAGGAGAAATTTGACACAGATGGAGAAATGATACTGCCTTGTGACAATGAAGTAGATTTAGCTGTTTTAGCTGCTTTACCACAGTCAATGCAACTTGATATTCTTGCACAGAATGTGTGTGCTTGTGCACTCTATCTTGAAAATATCATCTTCCTTTTACTTGCTTGTGTCATTTTTTCTTTTTATGTAAATGATAGGGGCAAGGGTAAGGGGATTCTGTTTAGAGAAAGTGACTTGGGTGGTTGTAGCTCAAAATGTGACAATGTGATATCAACAAATGACAATCAAGACAAAATTGATGAAATGTTAGCAGCCTCTATTGCTGCGGAGGGCATTGCAAAGTCTATGAGTAATGCATCAACTTTTTTTGAGGCTTCAGCCATTGAGGAAGAGGATGGTGACTATGATGAAGATGAAGAGATGATACTGCCTGCAATGCATGGTGAAGTTGATCCAGCTGTTCTGGCCTCTTTACCTCCATCAATGCAACTGGATCTCCTAGTTCAGATAAGAGAGCGATTAATTGCAGAGAATCGACAAAAGTATCAAAAAGTAAAGAAGGATCCTGCAAAATTTTCTGAGCTACAAATAGAAGCTTACCTTAAAACAGTTGCTTTTCGACGAGAGATAGATGAAGTGCAAAAAGCTGCTGCTGGAAGAGGAGTAGGGGGTATCCAAACTTCACGGATTGCATCTGAAGCCAACAGGGAGTACATATTCTCATCATCTTTTACTGGTGACAAACAAGAACTTGCATCAAGCAGAGCAGAGAAAAATGATGATGCTCATCGTAAGGCTCAAGGAACACATCCTGTGGAGAATCTTGCTAATATTATTGCATCAGCTGGTTCTAATACTACAAGTGGATTGGTTTGCAATGAACCTAGTGAATCTGTTGATGAAAGAATTCAGACCTTCCTAGATGAGAGGGGTCAATTTCGAGTTAGCAGATCAAGAGCTATGGGGATGCGTATGACCCGAGATTTGCAAAGAAATTTGGACTTGATGAAGGAGATTGAGCTGGAAAGAACACATATCAACAAGGCTTCAAATATTGATGCAATTTTGAGTGCAGAGAATAATGGTCCATCAAAAAGTTCTGGGACCAATTCTGTTGGTAAATTAAAAACTATGAATGTTGATCTAGTTGGCGAGTGTGTGCAAAATGAGCAATCTGTCTTTGACAAAGATACTTCTATAGAGGTATCCTTTGAATACGATAGCAAGAATGCACTCATTGATGCTGAAGATGAAATATTTGCTAATTTAGTAGGAGGAAATTCGGGGACAGTATTTCATGCTGATGGTACTCCAGCAAAAGAACATCCTTCTAATTCAGATTCAGATTGTGACTGGGAGGAAGGAATTGTTGAAGGGAAGAATACCTTCATTCCTGGAAATAATAAAGTGGAATGGAATTCTTCTGTTGCTGAAGGGGATAATAATGATGAGAGTGAAGTAGAATGGGAGGAAGGAGATTGTGATGGTGATAAAAGTACCATATGTTGCCCATCTGAGACTGGGAAAAAGCCAACTCGAGGTCAATTGGAGGAGGAGTCTAATTTGCAGGAAGCAATTAGGAGAAGTCTTGAGACTATAGGAGATGGAGAGCTTAAGCACCTATCATCTGTAGATGAGCATTCAAATGCTGATGAGAAAAAATTGGATTCCCATGGTGATTATTTGGATGTTTCTGGTGCAATGAATTTAAATGATGAAGATGCATTTCTGAAGATCAAAAATAGTATGGCTGTTTCATCTTCTCCAAGGGAAGATGGTTCTAAACAAAATATATTTCATGGAAATGTGGATGCCGATGGTTATGTCAACTCCCAAACTTCTGATTTTCCTAGGGATGCAAATATGATGAAGGACAATGACCATATGGCTGCAGAACAATTGTTGGATAAACATTGTGATGATACTAAGGTGTCTTCCGATGGCAAAAATGTTTCCAAGGATAATCCACTTGGTTCCACTGGTAAGGAGAAACCTAACTATAATAATGAATCTCAGCCATTGATTAATTCTGATGATAATACCAAGTTTGCCACTCCTTTGACAGAATCATCCTTGAAGGGATCAACAGAAAATGTTGATATTGGGCCAAAGTTAGCTGCAGTGGACAATGATGGAAGCTTCAGAGGAGAAAGAAATATTGATCTTGTGAAAAATGCAGTTAACACCTCAGGAGATTTTCCAGCACATGTAGACGAGGTTAGATTGGAGGAGGAAATACGAATACTTGGTCAAGAATATATAAACCTTGAAAATGAGCAGAAGAAACTTGAAAGAAATGCAGAATCTGTCAATAGTGAATTGTTCACAGAATGTCAGGAATTACTGCAAATGTTTGGTTTGCCATATATTATTGCCCCAATGGAAGCTGAGGCACAGTGTGCTTTCTTGGAAACTGCAAAACTGGTTGATGGTGTTATAACTGATGATTCTGACGTCCTTCTATTTGGAGCTCGTAATGTTTACAAGAATATATTTGATGATCGCAAATATGTAGAGACATACTTCATGGAGGACATTGAGAAGGAACTTGGATTGAGCAGGGAAAAATTAGTACGCATGGCACTACTACTTGGGAGTGATTATACCGAAGGTGTAAGTGGCATTGGGATTGTCAATGCTATTGAGGTTGTGAATGCGTTCCCTGAGAAAGATGGCCTCTTGAAATTCCGCCAGTGGGTTGAATCACCAGATCCCACCATTCTTGGATGGTTGAATACAAAAGGTGGATCAACTACAAGAAAGAAAGGATCAAAAGAGACTTCGTCGGATCAAATTAATAGTCATATTAAGGAACAAGAGGATTCGCTGGATTGTGACCAAGAAATCAAGCAAACCTTTTTTGAGAAACATAGAAATGTTAGCAAGAATTGGCATATTCCATCTTCTTTTCCAAGTGAAACAGTTATATCTGCTTATTATTCTCCACAAGTTGACAAGTCAACCGAGCCTTTCACCTGGGGAAAGCCAGATCATCTTGTTCTTCGAAAATTGTGCTGGGAGAAATTTGGGTGGACTAGCCAGAAAGCAGATGAATTACTATTACCTGTTTTAAAGGAATATAACAAACATGAGACTCAACTGCGTTTGGAAGCGTTTTATAGTTTCAATGAACGATTTGCAAAAATTCGTAGCAAGAGAATTAAGAAAGCTGTAAAAGGGATTACTGGTAAGCAGCCTTCAGAATTGAAGGATGATTTCAACAGTGGCAAGAGTAGGAGAGGAAATCATCTAGAATCTGAGGACAAAAATTTTGAGAATCTAAAGGCGACAAAGGAAAGTCTTGAAAGTTTGAAGAAACCTAAAGTGAAAGAATCAAGGAAAAGGAAGAATGATGGGGACATTCTTGGGAAGGCAATGTCAAAGAGAAGGACAATCATTGATGGTCCTTCTTCAGCTTCTGGTATGTCTGCAGTGGAGAATTTACAGCCGGGTACCGAGTCTGAAAAAGACCAAAGTGATAGTAATCCATTGATTTCAAATAGAAGTGGGAGGGGCAGAGGAAGAGGCAGAAGTTTGGCAGTAAAACATGGAAGGAAAAAGGAAAGTCTCATTTATCAATCATCTGGAACGTCATCTTCCAGTAGTGACACTGATGATCATGTTGATATGTCAAAAGTTCCTCAAGAGGTTCGAAGGTCCTCACGTTCCAGAAAACCTGTCAATTATTCACTTGAGAACCCAGAAGATGAAGAACTCAATGAGTCATTTGATACGAGGAATCAATCATCCTTGTGTGAAGATCCATTAGAAGAAAATTTATCTGATATTCCTGGTGCATGTGGGGATTCTGCAACTGGTTTAAGCAGAGGTAAAGAGAGTGATATGATAAGTAGTGCTCCAACCAGGAACTTCCCTAGAGACGATCTTGGGTCGGAAGGTCAATTTTTCACGGATGCTGATGAAACTACTCATCCAGATCCAGGAATTGGTGATGGTGATATTACTGTTAATGCTGACTCTTGTGATGACTACCTTAAACTAGGAGGTGGTTTTTGTTTAGATGATAGTGATGAACCTAGCAATCAGAATGCAGTTGATGGTGTCGATACTGCTGATACTGAAGGATTTCTGCACTGTTCTGTTATGATGGATGAGACTGACCATCATAAAAATGGTTCTGAGATATTACTTTCAGGCACCGATAATGCTCGCAGCGAGATGCAAGAGGGACGCAATGCCTACAATGTTGACAACGAGCCAAATGATAACCTTCCAAATGTTAGTGCCAATGATCAAAATCAAATGGGGGTCTCTGTACCTGAGAATGTTAATCATAATAATGGAAACTACAATGGGGCATTTAGTGCAATGCCATTTTTGAGGAAAAGAAGGAAGAAGTAG 5022 0.4076 MGVHGLWELLAPVGRRVSVETLAGKTLAVDASIWMVQFMKAMRDEKGEMVRNAHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKVRKTAEKLLLNHLKALRLKEVADDIKNQRLQQKSEAKGCKKPDRMDFVDSDPGKSNMKEINEMSSAKLAATEAGNFLQEVVSRSRNQEELDEMLAASISAEENGILAGKEVPSTVPNTSEEKFDTDGEMILPCDNEVDLAVLAALPQSMQLDILAQNVCACALYLENIIFLLLACVIFSFYVNDRGKGKGILFRESDLGGCSSKCDNVISTNDNQDKIDEMLAASIAAEGIAKSMSNASTFFEASAIEEEDGDYDEDEEMILPAMHGEVDPAVLASLPPSMQLDLLVQIRERLIAENRQKYQKVKKDPAKFSELQIEAYLKTVAFRREIDEVQKAAAGRGVGGIQTSRIASEANREYIFSSSFTGDKQELASSRAEKNDDAHRKAQGTHPVENLANIIASAGSNTTSGLVCNEPSESVDERIQTFLDERGQFRVSRSRAMGMRMTRDLQRNLDLMKEIELERTHINKASNIDAILSAENNGPSKSSGTNSVGKLKTMNVDLVGECVQNEQSVFDKDTSIEVSFEYDSKNALIDAEDEIFANLVGGNSGTVFHADGTPAKEHPSNSDSDCDWEEGIVEGKNTFIPGNNKVEWNSSVAEGDNNDESEVEWEEGDCDGDKSTICCPSETGKKPTRGQLEEESNLQEAIRRSLETIGDGELKHLSSVDEHSNADEKKLDSHGDYLDVSGAMNLNDEDAFLKIKNSMAVSSSPREDGSKQNIFHGNVDADGYVNSQTSDFPRDANMMKDNDHMAAEQLLDKHCDDTKVSSDGKNVSKDNPLGSTGKEKPNYNNESQPLINSDDNTKFATPLTESSLKGSTENVDIGPKLAAVDNDGSFRGERNIDLVKNAVNTSGDFPAHVDEVRLEEEIRILGQEYINLENEQKKLERNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAFLETAKLVDGVITDDSDVLLFGARNVYKNIFDDRKYVETYFMEDIEKELGLSREKLVRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEKDGLLKFRQWVESPDPTILGWLNTKGGSTTRKKGSKETSSDQINSHIKEQEDSLDCDQEIKQTFFEKHRNVSKNWHIPSSFPSETVISAYYSPQVDKSTEPFTWGKPDHLVLRKLCWEKFGWTSQKADELLLPVLKEYNKHETQLRLEAFYSFNERFAKIRSKRIKKAVKGITGKQPSELKDDFNSGKSRRGNHLESEDKNFENLKATKESLESLKKPKVKESRKRKNDGDILGKAMSKRRTIIDGPSSASGMSAVENLQPGTESEKDQSDSNPLISNRSGRGRGRGRSLAVKHGRKKESLIYQSSGTSSSSSDTDDHVDMSKVPQEVRRSSRSRKPVNYSLENPEDEELNESFDTRNQSSLCEDPLEENLSDIPGACGDSATGLSRGKESDMISSAPTRNFPRDDLGSEGQFFTDADETTHPDPGIGDGDITVNADSCDDYLKLGGGFCLDDSDEPSNQNAVDGVDTADTEGFLHCSVMMDETDHHKNGSEILLSGTDNARSEMQEGRNAYNVDNEPNDNLPNVSANDQNQMGVSVPENVNHNNGNYNGAFSAMPFLRKRRKK 1673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02534 1673 Coils Coil 1304 1324 - -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 1425 1452 - -
Adu06g02534 1673 CDD PIN_XPG_RAD2 989 1073 - -
Adu06g02534 1673 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 311 1673 - -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 860 918 - -
Adu06g02534 1673 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS 1 257 - -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 681 720 - -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 1410 1424 - -
Adu06g02534 1673 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Adu06g02534 1673 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 72 91 IPR006084 -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 686 700 - -
Adu06g02534 1673 Pfam Ubiquitin binding region 369 393 IPR025527 -
Adu06g02534 1673 Pfam Ubiquitin binding region 235 257 IPR025527 -
Adu06g02534 1673 SMART HhH_4 1074 1107 IPR008918 GO:0003677|GO:0003824
Adu06g02534 1673 Pfam XPG I-region 1006 1087 IPR006086 GO:0004518
Adu06g02534 1673 PRINTS Xeroderma pigmentosum group G protein signature 54 77 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Adu06g02534 1673 PRINTS Xeroderma pigmentosum group G protein signature 96 118 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Adu06g02534 1673 PRINTS Xeroderma pigmentosum group G protein signature 2 19 IPR001044 GO:0003697|GO:0004519|GO:0005634|GO:0006289
Adu06g02534 1673 MobiDBLite consensus disorder prediction 805 826 - -
Adu06g02534 1673 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 1072 1268 IPR036279 -
Adu06g02534 1673 Gene3D - 955 1071 - -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 1353 1388 - -
Adu06g02534 1673 Gene3D - 1072 1126 - -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 1290 1347 - -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 133 155 - -
Adu06g02534 1673 SMART xpgineu 1003 1072 IPR006086 GO:0004518
Adu06g02534 1673 CDD H3TH_XPG 1075 1206 - -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 1132 1162 - -
Adu06g02534 1673 ProSitePatterns XPG protein signature 2. 1006 1020 IPR019974 GO:0016788
Adu06g02534 1673 ProSitePatterns XPG protein signature 1. 70 84 IPR019974 GO:0016788
Adu06g02534 1673 Pfam XPG N-terminal domain 1 97 IPR006085 GO:0004518
Adu06g02534 1673 MobiDBLite consensus disorder prediction 1139 1162 - -
Adu06g02534 1673 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 311 1673 - -
Adu06g02534 1673 PANTHER DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED 1 257 - -
Adu06g02534 1673 SUPERFAMILY PIN domain-like 2 1087 IPR029060 -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 1278 1517 - -
Adu06g02534 1673 Gene3D - 1 144 - -
Adu06g02534 1673 SMART xpgn3 1 98 IPR006085 GO:0004518
Adu06g02534 1673 Coils Coil 959 993 - -
Adu06g02534 1673 MobiDBLite consensus disorder prediction 869 917 - -
Adu06g02534 1673 CDD PIN_XPG_RAD2 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02534 Adu-Chr6 100167568 100178785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02534 997 1104 Core DNA Replication Machinery Family AT5G26680 35.135 2.10e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02534 K10846 - gmx:100820295 1941.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02534 06 100167568 100178785 Adu06g02534 06 100167568 100178785 ECH