Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02510 ATGGATTATTCCAGAATTATCGAGTCTTCAGAAACTCACAGGAATAAGTGTGCGGCATGCTTCAGACAGTTCAACAAACTGGAGCACTTGGTGGAGCACATGAGAATCTCATACCATTCGGGTCATGAACCAACTTGTGCCATTTGCAGAAAACACTGCAGGTCATTTGAGTCTCTAAGGGAACACCTTATAGTTTTATTACAAAATTGTCACCACGATTTTTGCTTGAAGGTGTTTGACAGCCCTAACTCGCGCAGGGTTCACCAAGAAAAATGCCAACTCTCTGGACTAACTGGAATGATTGGTCGGTTTTCTAGCATGGGTCTTCGAGATAATTTGACAATTGGATCAAGAGGAGCACCAGTAGTTGCACTTGCTTGTAAAATGGTTGGTGGTGGCAGTGATGGCTCACTTGATCTTTGTGCAAGAGTCTGCATAATTGATGAGCATGAGAACATCATCTTTCATTCTTATGTCAAACCACCATTTCCAGTCACTAATTATAGGTACGAGACAACAGGTATTAGAGCAGAATATTTGAGGGATGCAATACCAATGAGGCAAGTTCAGAGGAAGATTCAAGACTTCCTTTGCAATGGAGAGCCCATGTGGACAATTAGAGCAAGAGGTGGCAAGGCCAGGATTCTTGTTGGTCATGGTTTGGATCATGACCTAGAATGTCTCCAAATAGAATATCGACCAGAAAAGATAAGGGACACTGCAAAATACCCTCCTCTGATGAAAACAAGCAAGTTGAGCAACTCACTTAAATACTTAACACAAACATATCTAGGGTATGACATTCAAACTGGGATACAGGATCCTTATGATGATTGTGTTGCAACAATGAGACTCTACAAGAGAATGAGGTCCCAGGCACATAGAATGGAGGATTACCCTTTGGCATCTGACCCTCAGAACAGAAACAATTTTGCTTCTTGGAGACAAAGTGAGCTTGAAAGAATGAGTCCTGAACAAATGCTTGAAATTTCAAGGTCTGATTACTATTGCTGGTGCATGGATTCCTTATATACCTCATGA 1041 0.4159 MDYSRIIESSETHRNKCAACFRQFNKLEHLVEHMRISYHSGHEPTCAICRKHCRSFESLREHLIVLLQNCHHDFCLKVFDSPNSRRVHQEKCQLSGLTGMIGRFSSMGLRDNLTIGSRGAPVVALACKMVGGGSDGSLDLCARVCIIDEHENIIFHSYVKPPFPVTNYRYETTGIRAEYLRDAIPMRQVQRKIQDFLCNGEPMWTIRARGGKARILVGHGLDHDLECLQIEYRPEKIRDTAKYPPLMKTSKLSNSLKYLTQTYLGYDIQTGIQDPYDDCVATMRLYKRMRSQAHRMEDYPLASDPQNRNNFASWRQSELERMSPEQMLEISRSDYYCWCMDSLYTS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02510 346 PANTHER OS02G0709000 PROTEIN 8 342 - -
Adu06g02510 346 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Adu06g02510 346 Gene3D - 119 304 IPR036397 GO:0003676
Adu06g02510 346 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 8 342 - -
Adu06g02510 346 CDD REX4_like 123 287 IPR037431 GO:0006364|GO:0008408
Adu06g02510 346 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Adu06g02510 346 Pfam Exonuclease 140 286 IPR013520 -
Adu06g02510 346 SUPERFAMILY Ribonuclease H-like 135 291 IPR012337 -
Adu06g02510 346 SMART exoiiiendus 121 295 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02510 Adu-Chr6 99778533 99781510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02510 1 343 C2H2 Transcription Factor Family AT3G27970 71.629 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02510 - - gmx:100813973 612.838